These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9048#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1302 fasta sequence [ATAGTTCTATAACATCTTCAGAAGCAGCTACATTGATCTCAGAACGGGTAGCAGCTATTGTGGATAAATTATTCAACAATTCATCAGAGAGCAAATCTAAGTCTAGTAATCATCATGCTAACTATTACAGTACCTCTATTCCTCATTTGGATTTCGCTGATGTAGCTAGTCAAGCTATTTCGGCTGGTCGAGAAACAGTTGCGGAGCAAATATTAGAGTATGAGCCACGCGCTTGGCGTCAGGTACCATTACTTCTTAAATTATCTCGTTACAATCGTGCATTAGTTCGAGCGGTAGAGACTGGAAATCCTGAACTAATTACTACGGTCGTGGTAGCATTGCAAGAGCAAAGTAAATTACCACCGGCAGATCTTGCAATGGTACTTCGTCGGCATCCAATAGCTCTGGCCATATATCAAGAGACACTGGAACAAGCTGACCATTCTAAATCTGGTTCTGAAAATTCAACAAAATCTGCTCTTTTAAATTTTGATCATGAAAATGATCGTGCTTCAGAAGCTAAAAAAATTGTTCTATCAGCCTATCAAGAAAATAGCTTGGTTTCACGATTGACATTACTACAAAATGCTGAAGAGATTTATCGTCAATCAAAGAATGACTTCATGGCTCAGCAATGTAACGCTCAAATCCGCCTATTGAAATTTCAAAGTAAACTTGAGAAACAAGAAATATCTGCTCCTGTCTTCGAAATTAAATCCATACCCGGCTCTAATCGTATATTACCGGAGGTAATACAGTCTAGTAGTATAAATGAGAAGCTTTGGGTTGGTCAATCGTTAAACACAACACTCAGTCGTTTATTAGCTTCCGGGCAATCCGAACGTCAAGCAGATCAATTACGCAGGGAATTCAGAGTTTCAGAGAAACGTTTCGCTTTTCTTCGTGTTGTTGGTATGGCTATCAACAATGCATCTTGGTCAGGAATGGATAAAATGATTCGAGCAAAAAAACCACCGGTTAATGTTGAGATATTAATCAAAATCTGTATCGACGGCAATCGTATAGATGAAGCGGTAAAACTAATTTCTAAACTTCCACCTGAACGAACAGTCCGTTTCTGGGTAATGGCTGGTAGAATCGAAGAAGCCATTCAAGTAGCTGTTCGTGAGAAATCAGAATATGATTTGCTGTATATTCAGCGTGAAGTTGGAAAAACCAACACAGAATTGTATGATCGGATTATTAGTCTACGAGCACACATCCAGCGGTGATTTATATTGACACATAACGGAAATTTCTTTGCAACGACATTAGTTCTATCTACCGCCTATCTACTTTTCT] [+] EMBL CD094633 [ATAGTTCTATAACATCTTCAGAAGCAGCTACATTGATCTCAGAACGGGTAGCAGCTATTGTGGATAAATTATTCAACAATTCATCAGAGAGCAAATCTAAGTCTAGTAATCATCATGCTAACTATTACAGTACCTCTATTCCTCATTTGGATTTCGCTGATGTAGCTAGTCAAGCTATTTCGGCTGGTCGAGAAACAGTTGCGGAGCAAATATTAGAGTATGAGCCACGCGCTTGGCGTCAGGTACCATTACTTCTTAAATTATCTCGTTACAATCGTGCATTAGTTCGAGCGGTAGAGACTGGAAATCCTGAACTAATTACTACGGTCGTGGTAGCATTGCAAGAGCAAAGTAAATTACCACCGGCAGATCTTGCAATGGTACTTCGTCGGCATCCAATAGCTCTGGCCATATATCTAGAGACACTGGAACAAGCTGACCATTCTAAATCTGGTTCTGAAAATTCAACANAATCTGCTCTTTT ] [+] EMBL CD094584 [ATAGTTCTATAACATCTTCAGAAGCAGCTACATTGATCTCAGAACGGGTAGCAGCTATTGTGGATAAATTATTCAACAATTCATCAGAGAGCAAATCTAAGTCTAGTAATCATCATGCTAACTATTACAGTACCTCTATTCCTCATTTGGATTCCGCTGATGTAGCTAGTCAAGCTATTTCGGCTAGTCGAGAAACAGTTGCGGAGCAAATATTAGAGTATGAGCCACGCGCTTGGCGTCAGGTACCATTACTTCTTAAATTATCTCGTTACAATCGTGCATTAGTTCGAGCGGTAGAGACTGGAAATCCTGAACTAATTACTACGGTCGTGGTAGCATTGCAAGAGCAAAGTAAATTACCACCGGCAGATCTTGCAATGGTACTTCGTCGGCATCCAATAGCTCTGGCCATATATCAAGAGACACTGGAACAAGCTGACCATTCTAAATCTGGTTCTGAAAATTCAACAAAATCTGCTCTTTTAAATTTTGATCATGAAAATGATCGTGCTTCAGAAGCTAAAAAAATTGTTCTATCAGCCTATCAAGTAAATAGCTTGGTTTCACGATTGACATTACTACAAAATGCTGAAGAGATTTATCGTCAATC ] [+] EMBL CD094564 [ATAGTTCTATAACATCTTCAGAAGCAGCTACATTGATCTCAGAACGGGTAGCAGCTATTGTGGATAAATTATTCAACAATTCATCAGAGAGCAAATCTAAGTCTAGTAATCATCATGCTAACTATTACAGTACCTCTATTCCTCATTTGGATTTCGCTGATGTAGCTAGTCAAGCTATTTCGGCTGGTCGAGAAACAGTTGCGGAGCAAATATTAGAGTATGAGCCACGCGCTTGGCGTCAGGTACCATTACTTCTTAAATTATCTCGTTACAATCGTGCATTAGTTCGAGCGGTAGAGACTGGAAATCCTGAACTAATTACTACGGTCGTGGTAGCATTGCAAGAGCAAAGTAAATTACCACCGGCAGATCTTGCAATGGTACTTCGTCGGCATCCAATAGCTCTGGCCATATATCAAGAGACACTGGAACAAGCTGACCATTCTAAATCTGGTTCTGAAAATTCAACAAAATCTGCTCTTTTAAATTTTGATCATGAAAATGATCGTGCTTCAGAAGCTAAAAAAATTGTTCTATCAGCCTATCAAGAAAATAGCTTGGTTTCACGATTGACATTACTACAAAATGCTGAAGAGATTTAT ] [+] EMBL CD094472 [ATAGTTCTATAACATCTTCAGAAGCAGCTACATTGATCTCAGAACGGGTAGCAGCTATTGTGGATAAATTATTCAACAATTCATCAGAGAGCAAATCTAAGTCTAGTAATCATCATGCTAACTATTACAGTACCTCTATTCCTCATTTGGATTTCGCTGATGTAGCTAGTCAAGCTATTTCGGCTGGTCGAGAAACAGTTGCGGAGCAAATATTAGAGTATGAGCCACGCGCTTGGCGTCAGGTACCATTACTTCTTAAATTATCTCGTTACAATCGTGCATTAGTTCGAGCGGTAGAGACTGGAAATCCTGAACTAATTACTACGGTCGTGGTAGCATTGCAAGAGCAAAGTAAATTACCACCGGCAGATCTTGCAATGGTACTTCGTCGGCATCCAATAGCTCTGGCCATATATCAAGAGACACTGGAACAAGCTGACCATTCTAAATCTGGTTCTGAAAATTCAACAAAATCTGCTCTTTTAAATTTTGATCATGAAAATGATCGTGCTTCAGAAGCTAAAAAAATTGTTCTATCAGCCTATCAAGAAAATAGCTTGGTTTCACGATTGACATTACTACA ] [-] EMBL CD095387 [ AGACTGGAAATCCTGAACTAATTACTACGGTCGTGGTAGCATTGCAAGAGCAAAGTAAATTACCACCGGCAGATCTTGCAATGGTACTTCGTCGGCATCCAATAGCTCTGGCCATATATCAAGAGACACTGGAACAAGCTGACCATTCTAAATCTGGTTCTGAAAATTCAACAAAATCTGCTCTTTTAAATTTTGATCATGAAAATGATCGTGCTTCAGAAGCTAAAAAAATTGTTCTATCAGCCTATCAAGAAAATAGCTTGGTTTCACGATTGACATTACTACAAAATGCTGAAGAGATTTATCGTCAATCAAAGAATGACTTCATGGCTCAGCAATGTAACGCTCAAATCCGCCTATTGAAATTTCAAAGTAAACTTGAGAAACAAGAAATATCTGCTCCTGTCTTCGAAATTAAATCCATACCCGGCTCTAATCGTATATTACCGGAGGTAATACAGTCTAGTAGTATAAATGAGAAGCTTTGGGTTGGTCAATCGTTAAACACAACACTCAGTCGTTTATTAGCTTCCGGGCAATCCGAACGTCAAGCA ] [-] EMBL CD094687 [ CAGATCTTGCAATGGTACTTCGTCGGCATCCAATAGCTCTGGCCATATATCAAGAGACACTGGAACAAGCTGACCATTCTAAATCTGGTTCTGAAAATTCAACAAAATCTGCTCTTTTAAATTTTGATCATGAAAATGATCGTGCTTCAGAAGCTAAAAAAATTGTTCTATCAGCCTATCAAGAAAATAGCTTGGTTTCACGATTGACATTACTACAAAATGCTGAAGAGATTTATCGTCAATCAAAGAATGACTTCATGGCTCAGCAATGTAACGCTCAAATCCGCCTATTGAAATTTCAAAGTAAACTTGAGAAACAAGAAATATCTGCTCCTGTCTTCGAAATTAAATCCATACCCGGCTCTAATCGTATATTACCGGAGGTAATACAGTCTAGTAGTATAAATGAGAAGCTTTGGGTTGGTCAATCGTTAAACACAACACTCAGTCGTTTATTAGCTTCCGGGCAATCCGAACGTCAAGCA ] [+] EMBL CD126012 [ ATTGTTCTATCAGCCTATCAAGAAAATAGCTTGGTTTCACGATTGACATTACTACAAAATGCTGAAGAGATTTATCGTCAATCAAAGAATGACTTCATGGCTCAGCAATGTAACGCTCAAATCCGCCTATTGAAATTTCAAAGTAAACTTGAGAAA ] [+] EMBL CD065265 [ AACTTGAGAAACACGAAATATCTGCTCCTGTCTTCGAAATTAAATCCATACCCGGCTCTAATCGTATATTACCGGAGGTACTACAGTCTAGTAGTATAAATGAGAAGCTTTGGGTTGGTCAATCGTTAAACACAACACTCAGTCGTTTATTAGCTTCCGGGCAATCCGAACGTCAAGCAGATCAATTACGCAGGGAATTCAGAGTTTCAGAGAAACGTTTCGCTTTTCTTCGTGTTGTTGGTATGGCTATCAACAATGCATCTTGGTCAGGAATGGATAAAATGATTCGAGCAAAAAAACCACCGGTTAATGTTGAGATATTAATCAAAATCTGTATCGACGGCAATCGTATAGATGAAGCGGTAAAACTAATTTCTAAACTTCCACCTGAACGAACAGTCCGTTTCTGGGTAATGGCTGGTAGAATCGAAGAAGCCATTCAAGTAGCTGTTCGTGAGAAATCAGAATATGATTTGCTGTATATTCAGCGTGAAGTTGGAAAAACCAACACAGAATTGTATGATCGGATTATTAGTCTACGAGCACACATCCAGCGGTGATTTATATTGACACATAACGGAAATTTCTTTGCAACGACATTAGTTCTATCTACCGCCTATCTACTTTTCT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||