cluster # 9205

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Schistosoma mansoni
cluster # 9205 cluster # 9205 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9205#0 length = 950 sequences # 4

consensus_9205#1 length = 628 sequences # 3
consensus_9205#2 length = 251 sequences # 1

consensusID : consensus_9205#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 950
fasta sequence

                              [TCAATCTGACGGCCTGCACATTACTCGAATGAGCATTCAGAACCTGGTTTAGTAACGTGTTACAACAGTGTACATGTTCCGATGGTTCAGAGGGTTAGTATAACTATGCATGTCATAGGGATGACGCAAAGCTTGGTTGAATAAGTTGTTTAGTGAACGAGAACTAGTCGCTGTCATGCGATCAGAACACCAGACGTTCTGCTGAAGCGAATTGTGACTAATGCTTATCCCTGCGTGTTGATCTGCTGTATGGGATTACTTGGAATGGATTCGTTTGAGTTTCTTGACGCCGGGTTTTCGTCAGTCTGTTTGTTTGCATGCCGAGTTGGTGGTCATAGATATTGCACCAGGGTTAAAACAACTGAGGCTCACAGGTTAAAGAAGCGTGGTTCGAAATGGTCTGACTTCAAATCAACAGGTTTACAGATGACCAACCTTCAGATGGTAAGTGGGTATTGTTTGTTTTCCAACTGTATGCATATCAGTAGGTATCTCCCCGTAAGCAGTCCTCAACTTTCTTAACCGTACGTTGGCCATGTCATTGTTGCAACTATTGCAGCATGGAATACTTATCTCATGACAACCGATTGGTTCGGGCTTCGCTCTTATGAGTTACGGTTTTGTCAAAACGTGATTTTGTCCGCAACTGCAGTTGGAGTCCCAACAGTTCTCTGGATTGTCGAGAAGTATAGCATCTTGTGTGTCATTGTTATAAACTGCTGTCCAGCGGGAACACAGCTAGTGATAGGATTAATTCTAACAGTACGGCAAACACGCATGCTTTTTCGTGATTGTAATGCTGTGCAGATTGTATCGAGATTCAGTTCAAACCTAAAAGCCTTCATTTCATTGGGTCGTCAGATAAGTGTCACGCCTGTCGGCGCTATGACTAGTGAAGCCTTGATTTCAAACCACCGGTATGTACGAACTCCAGTATCCTGAGGACACTT]

[-] EMBL CD182823             [TCAATCTGACGGCCTGCACATTACTCGAATGAGCATTCAGAACCTGGTTTAGTAACGTGTTACAACAGTGTACATGTTCCGATGGTTCAGAGGGTTAGTATAACTATGCATGTCATAGGGATGACGCAAAGCTTGGTTGAATAAGTTGTTTAGTGAACGAGAACTAGTCGCTGTCATGCGATCAGAACACCAGACGTTCTGCTGAAGCGAATTGTGACTAATGCTTATCCCTGCGTGTTGATCTGCTGTATGGGATTACTTGGAATGGATTCGTTTGAGTTTCTTGACGCCGGGTTTTCGTCAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD070261             [                                                                                                                                                                                                            AAGCGAATTGTGACTAATGCTTATCACTGCGTGTTGATCTGCTGTATGGGATTACTTGGAATGGATTCGTTTGAGTTTCTTGACGCCGGGTTTTCGTCAGTCTGTTTGTTTGCATGCCGAGTTGGTGGTCATAGATATTGCACCAGGGTTAAAACAACTGAGGCTCACAGGTTAAAGAAGCGTGGTTCGAAATGGTCTGACTTCAAATCAACAGGTTTACAGATGACCAACCTTCAGATGGTAAGTGGGTATTGTTTGTTTTCCAACTGTATGCATATCAGTAGGTATCTCCCCGTAAGCAGCCCTCAACTTTCTTAACCGTACGTTGGCCATGTCATTGTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD191896             [                                                                                                                                                                                                                                                                               CGTTTGAGTTTCTTGACGCCGGGTTTTCGTCAGTCTGTTTGTTTGCATGCCGAGTTGGTGGTCATAGATATTGCACCAGGGTTAAAACAACTGAGGCTCACAGGTTAAAGAAGCGTGGTTCGAAATGGTCTGACTTCAAATCAACAGGTTTACAGATGACCAACCTTCAGATGGTAAGTGGGTATTGTTTGTTTTCCAACTGTATGCATATCAGTAGGTATCTCCCCGTAAGCAGTCCTCAACTTTCTTAACCGTACGTTGGCCATGTCATTGTTGCAACTATTGCAGCATGGAATACTTATCTCATGACAACCGATTGGTTCGGGCTTCGCTCTTATGAGTTACGG                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD153092             [                                                                                                                                                                                                                                                                                                                                                                                                                       CAAATCAACAGGTTTACAGATGACCAACCTTCAGATGGTAAGTGGGTATTGTTTGTTTTCCAACTGTATGCATATCAGTAGGTATCTCCCCGTAAGCAGTCCTCAACTTTCTTAACCGTACGTTGGCCATGTCATTGTTGCAACTATTGCAGCATGGAATACTTATCTCATGACAACCGATTGGTTCGGGCTTCGCTCTTATGAGTTACGGTTTTGTCAAAACGTGATTTTGTCCGCAACTGCAGTTGGAGTCCCAACAGTTCTCTGGATTGTCGAGAAGTATAGCATCTTGTGTGTCATTGTTATAAACTGCTGTCCAGCGGGAACACAGCTAGTGATAGGATTAATTCTAACAGTACGGCAAACACGCATGCTTTTTCGTGATTGTAATGCTGTGCAGATTGTATCGAGATTCAGTTCAAACCTAAAAGCCTTCATTTCATTGGGTCGTCAGATAAGTGTCACGCCTGTCGGCGCTATGACTAGTGAAGCCTTGATTTCAAACCACCGGTATGTACGAACTCCAGTATCCTGAGGACACTT]




>consensus_9205#0
TCAATCTGACGGCCTGCACATTACTCGAATGAGCATTCAGAACCTGGTTTAGTAACGTGT
TACAACAGTGTACATGTTCCGATGGTTCAGAGGGTTAGTATAACTATGCATGTCATAGGG
ATGACGCAAAGCTTGGTTGAATAAGTTGTTTAGTGAACGAGAACTAGTCGCTGTCATGCG
ATCAGAACACCAGACGTTCTGCTGAAGCGAATTGTGACTAATGCTTATCCCTGCGTGTTG
ATCTGCTGTATGGGATTACTTGGAATGGATTCGTTTGAGTTTCTTGACGCCGGGTTTTCG
TCAGTCTGTTTGTTTGCATGCCGAGTTGGTGGTCATAGATATTGCACCAGGGTTAAAACA
ACTGAGGCTCACAGGTTAAAGAAGCGTGGTTCGAAATGGTCTGACTTCAAATCAACAGGT
TTACAGATGACCAACCTTCAGATGGTAAGTGGGTATTGTTTGTTTTCCAACTGTATGCAT
ATCAGTAGGTATCTCCCCGTAAGCAGTCCTCAACTTTCTTAACCGTACGTTGGCCATGTC
ATTGTTGCAACTATTGCAGCATGGAATACTTATCTCATGACAACCGATTGGTTCGGGCTT
CGCTCTTATGAGTTACGGTTTTGTCAAAACGTGATTTTGTCCGCAACTGCAGTTGGAGTC
CCAACAGTTCTCTGGATTGTCGAGAAGTATAGCATCTTGTGTGTCATTGTTATAAACTGC
TGTCCAGCGGGAACACAGCTAGTGATAGGATTAATTCTAACAGTACGGCAAACACGCATG
CTTTTTCGTGATTGTAATGCTGTGCAGATTGTATCGAGATTCAGTTCAAACCTAAAAGCC
TTCATTTCATTGGGTCGTCAGATAAGTGTCACGCCTGTCGGCGCTATGACTAGTGAAGCC
TTGATTTCAAACCACCGGTATGTACGAACTCCAGTATCCTGAGGACACTT

consensusID : consensus_9205#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 628
fasta sequence

                              [CGGGAATTCGATTGAAATAACGTGTTACTAGTGAAGCCTTGATTTCAAACCACCGGTATGTACGAACTCCAGTATCCTGAGGACACTTAATGTGTGAACAACCCGTTGGTGACCTGCAGCCGTGGGACCGCATCTATTGACTTAGCTACAGTCTTACTGATCAGATTTTCAGGTAGATGGCTCCGGTGGTGAACCTCTAAGATGACCTACTTTCGTTAGGACCCCAGGCTAGTATCATGATTCCTATACAAATAAAATATGGTTTTTTTGGCGCAAATGTATTCGGCACTTCTTATATCAATATTTATGTATTCAAATGAAAGTCACATCGGAGTATGTTGTTTAGTTCGTATTTGATGAGGGATTTTGAGCTGGGTAGTAGTTGTTTTGGACCCGATGAATGTAAGATCTACAATGTGTTTTGTGGTTGATCTGTCACTAAAGTTAACAGAGAAGACTCTAACCAAACCCAAAGGCTATGTTGAATTTTTTTCAATCTAACAGTACGGCAAACACGCATGCTTTTTCGTGATTGTAATGCTGTGCAGATTGTATCGAGATTCAGTTCAAACCTAAAAGCCTTCATTTCATTGGGTCGTCAGATAAGTGTCACGCCTGTCGGCGCTAT]

[+] EMBL CD134223             [CGGGAATTCGATTGAAATAACGTGTTACTAGTGAAGCCTTGATTTCAAACCACCGGTATGTACGAACTCCAGTATCCTGAGGACACTTAATGTGTGAACAACCCGTTGGTGACCTGCAGCCGTGGGACCGCATCTATTGACTTAGCTACAGTCTTACTGATCAGATTTTCAGGTAGATGGCTCCGGTGGTGAACCTCTAAGATGACCTACTTTCGTTA                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD121940             [                                                                                                                                     CTATTGACTTAGCTACAGTCTTACTGATCAGATTTTCAGGTAGATGGCTCCGGTGGTGAACCTCTAAGATGACCTACTTTCGTTAGGACCCCAGGCTAGTATCATGATTCCTATACAAATAAAATATGGTTTTTTTGGCGCAAATGTATTCGGCACTTCTTATATCAATATTTATGTATTCAAATGAAAGTCACATCGGAGTATGTTGTTTAGTTCGTATTTGATGAGGGATTTTGAGCTGGGTAGTAGTTGTTTTGGACCCGATGAATGTAAGATCTACAATGTGTTTTGTGGTTGATCTGTCACTAAAGTTAACAGAGAAGACTCTAACCAAACCCAAAGGCTATGTTGAATTTTTTTCAATCTAACAGTACGGCAAACACGCATGCTTTTTCGTGATTGTAATGCTGTGCAGATTGTATC                                                                        ]
[-] EMBL CD121950             [                                                                                                                                                                      TTTCAGGTAGATGGCTCCGGTGGTGAACCTCTAAGATGACCTACTTTCGTTAGGACCCCAGGCTAGTATCATGATTCCTATACAAATAAAATATGGTTTTTTTGGCGCAAATGTATTCGGCACTTCTTATATCAATATTTATGTATTCAAATGAAAGTCACATCGGAGTATGTTGTTTAGTTCGTATTTGATGAGGGATTTTGAGCTGGGTAGTAGTTGTTTTGGACCCGATGAATGTAAGATCTACAATGTGTTTTGTGGTTGATCTGTCACTAAAGTTAACAGAGAAGACTCTAACCAAACCCAAAGGCTATGTTGAATTTTTTTCAATCTAACAGTACGGCAAACACGCATGCTTTTTCGTGATTGTAATGCTGTGCAGATTGTATCGAGATTCAGTTCAAACCTAAAAGCCTTCATTTCATTGGGTCGTCAGATAAGTGTCACGCCTGTCGGCGCTAT]




>consensus_9205#1
CGGGAATTCGATTGAAATAACGTGTTACTAGTGAAGCCTTGATTTCAAACCACCGGTATG
TACGAACTCCAGTATCCTGAGGACACTTAATGTGTGAACAACCCGTTGGTGACCTGCAGC
CGTGGGACCGCATCTATTGACTTAGCTACAGTCTTACTGATCAGATTTTCAGGTAGATGG
CTCCGGTGGTGAACCTCTAAGATGACCTACTTTCGTTAGGACCCCAGGCTAGTATCATGA
TTCCTATACAAATAAAATATGGTTTTTTTGGCGCAAATGTATTCGGCACTTCTTATATCA
ATATTTATGTATTCAAATGAAAGTCACATCGGAGTATGTTGTTTAGTTCGTATTTGATGA
GGGATTTTGAGCTGGGTAGTAGTTGTTTTGGACCCGATGAATGTAAGATCTACAATGTGT
TTTGTGGTTGATCTGTCACTAAAGTTAACAGAGAAGACTCTAACCAAACCCAAAGGCTAT
GTTGAATTTTTTTCAATCTAACAGTACGGCAAACACGCATGCTTTTTCGTGATTGTAATG
CTGTGCAGATTGTATCGAGATTCAGTTCAAACCTAAAAGCCTTCATTTCATTGGGTCGTC
AGATAAGTGTCACGCCTGTCGGCGCTAT

consensusID : consensus_9205#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 251
fasta sequence

                              [GACGTTCTGCTGAAGCGAATTGTGACTAATGCTTATCACTGCGTGTTGATCTGCTGTATGGGATTACTTGGAATGGATTCGTTTGAGTTTCTTGACGCCGGGTTTTCGTCAGTCTGTTTGTTTGCATGCCGAGTTGGTGGTCATAGATATTGCACCAGGGTTAAAACAACTGAGGCTCACAGGTTAAAGAAGCGTGGTTCGAAATGGTCTGACTTCAAATCAGCAGGTTTACAGATGACCGGGTACCGGAG]

[-] EMBL CD129253             [GACGTTCTGCTGAAGCGAATTGTGACTAATGCTTATCACTGCGTGTTGATCTGCTGTATGGGATTACTTGGAATGGATTCGTTTGAGTTTCTTGACGCCGGGTTTTCGTCAGTCTGTTTGTTTGCATGCCGAGTTGGTGGTCATAGATATTGCACCAGGGTTAAAACAACTGAGGCTCACAGGTTAAAGAAGCGTGGTTCGAAATGGTCTGACTTCAAATCAGCAGGTTTACAGATGACCGGGTACCGGAG]




>consensus_9205#2
GACGTTCTGCTGAAGCGAATTGTGACTAATGCTTATCACTGCGTGTTGATCTGCTGTATG
GGATTACTTGGAATGGATTCGTTTGAGTTTCTTGACGCCGGGTTTTCGTCAGTCTGTTTG
TTTGCATGCCGAGTTGGTGGTCATAGATATTGCACCAGGGTTAAAACAACTGAGGCTCAC
AGGTTAAAGAAGCGTGGTTCGAAATGGTCTGACTTCAAATCAGCAGGTTTACAGATGACC
GGGTACCGGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9205#0      TCAATCTGACGGCCTGCACATTACTCGAATGAGCATTCAGAACCTGGTTTAGTAACGTGT 60
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      ------------------------------------------------------------
                                                                                  

consensus_9205#0      TACAACAGTGTACATGTTCCGATGGTTCAGAGGGTTAGTATAACTATGCATGTCATAGGG 120
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      ------------------------------------------------------------
                                                                                  

consensus_9205#0      ATGACGCAAAGCTTGGTTGAATAAGTTGTTTAGTGAACGAGAACTAGTCGCTGTCATGCG 180
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      ------------------------------------------------------------
                                                                                  

consensus_9205#0      ATCAGAACACCAGACGTTCTGCTGAAGCGAATTGTGACTAATGCTTATCCCTGCGTGTTG 240
consensus_9205#2      ------------GACGTTCTGCTGAAGCGAATTGTGACTAATGCTTATCACTGCGTGTTG 48
consensus_9205#1      -----------------------------------------CGGGAATTCGATTGAAATA 19
                                                                *   **      *   * 

consensus_9205#0      ATCTGCTGTATGGGATTACTTGGAATGGATTCGTTTGAGTTTCTTGACGCCGGGTTTTCG 300
consensus_9205#2      ATCTGCTGTATGGGATTACTTGGAATGGATTCGTTTGAGTTTCTTGACGCCGGGTTTTCG 108
consensus_9205#1      ACGTGTTACTAGTGAAGCCTTGATTTCAAACCACCGGTATGTACGAACTCCAGTATCCTG 79
                      *  ** *    * **   ****   *  *  *    *  * *    ** ** *  *   *

consensus_9205#0      TCAGT-CTGTTTGTTTGCATGCCGAGTTGGTGGTC-ATAGATATTGCACCAGGGTTAAAA 358
consensus_9205#2      TCAGT-CTGTTTGTTTGCATGCCGAGTTGGTGGTC-ATAGATATTGCACCAGGGTTAAAA 166
consensus_9205#1      AGGACACTTAATGTGTGAACAACCCGTTGGTGACCTGCAGCCGTGGGACCGCATCTAT-- 137
                            **   *** ** *   *  *******  *   **   * * ***     **   

consensus_9205#0      CAACTGAGGCTCACAGGTTAAAGAAGCGTGGTTCGAAATGGTCTGACTTCAAATCAACAG 418
consensus_9205#2      CAACTGAGGCTCACAGGTTAAAGAAGCGTGGTTCGAAATGGTCTGACTTCAAATCAGCAG 226
consensus_9205#1      TGACTTAG--CTACAGTCTTACTGATCAGATTTTCAGGTAGA-TGGCTCCGGTGGTGAAC 194
                        *** **    ****  * *   * *    **  *  * *  ** ** *        * 

consensus_9205#0      GTTTACAGATGACCAACCTTCAGATGGTAAGTGGGTATTGTTTGTTTTCCAACTGTATGC 478
consensus_9205#2      GTTTACAGATGACCGGGTACCGGAG----------------------------------- 251
consensus_9205#1      CTCTA-AGATGACCTACTTTCGTTAGGACCCCAGGCTAGTATCATGATTC--CTATACAA 251
                       * ** ********      *                                       

consensus_9205#0      ATATCAGTAGGTATCTCCCCGTAAGCAGTCCTCAACTTTCTTAACCGTACGTTGGCCATG 538
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      ATAAAATATGGTTTTTTTGGCGCAAATGTATTCGGCACTTCT--------------TATA 297
                                                                                  

consensus_9205#0      TCATTGTTGCAACTATTGCAGCATGGAATACTTATCTCATGACAACCGATTGGTTCGGGC 598
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      TCAATATT-TATGTATTCAA--ATGAAAGTCACATCGGAGTATG-TTGTTTAGTTCGTAT 353
                                                                                  

consensus_9205#0      TTCGCTCTTATGAGTTACGGTTTTGTCAAAACGTGATTTTGTCCGCAACTGCAGTTGGAG 658
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      TTGA---TGAGGGATTTTGAGCTGGGTAGTA-GTTGTTTTGGACCCGATGAATGTAAGAT 409
                                                                                  

consensus_9205#0      TCCCAACA-GTTCTCTGGATTGTCGAGAAGTATAGCATCTTGTGTGTCATTGTTATAAAC 717
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      CTACAATGTGTTTTGTGGTTGATCTGTCACTAAAG-----------TTAACAGAGAAGAC 458
                                                                                  

consensus_9205#0      TGCTGTCCAGCGGGAACACAGCTAGTGATAGGATTAATTCTAACAGTACGGCAAACACGC 777
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      TCTAACCAAACCCAAAGGCTATGTTGAATTTTTTTCAATCTAACAGTACGGCAAACACGC 518
                                                                                  

consensus_9205#0      ATGCTTTTTCGTGATTGTAATGCTGTGCAGATTGTATCGAGATTCAGTTCAAACCTAAAA 837
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      ATGCTTTTTCGTGATTGTAATGCTGTGCAGATTGTATCGAGATTCAGTTCAAACCTAAAA 578
                                                                                  

consensus_9205#0      GCCTTCATTTCATTGGGTCGTCAGATAAGTGTCACGCCTGTCGGCGCTATGACTAGTGAA 897
consensus_9205#2      ------------------------------------------------------------
consensus_9205#1      GCCTTCATTTCATTGGGTCGTCAGATAAGTGTCACGCCTGTCGGCGCTAT---------- 628
                                                                                  

consensus_9205#0      GCCTTGATTTCAAACCACCGGTATGTACGAACTCCAGTATCCTGAGGACACTT 950
consensus_9205#2      -----------------------------------------------------
consensus_9205#1      -----------------------------------------------------