These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9430#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 899 fasta sequence [TTGCTTCACTTATTCTGAGGACATAAGTCGAATCATAACTTTTTAGTATTTCGGTTATTTGGATACAGTAGTGTTGCTTCTTTGGATTTCGGTGACGACAATCATGGCATCACCAGACGTTGGTATGGCGTATCACACACCTTCTCAAATAAGTCCTCAGAGTGGTAATATGACAACATCAACTAAAGTGCTCAATCTTTCGAGGGCCCAAGTCAACTTGGCTCAACCAGCATATGGTGCTTATCCAACATCAGTATCCCCACAACAATCCACTCCGACAAATGCTTATAATTATTCAAATCAACAAAGTCAATCACCCTCATTTTATGCTTATCCTAGTCAGACAGGATTTGAACAACCTGATAGCAACTTTAATAAACCAGGTTTTCAAAATTTTGCGCAACCTCAAGTTTTTACAATTGGTTCTAATCAAGCGTCTCAAATGCAGCCAACTCAGTATCGACAGCAAATTCAACAGCCTCAGCAACCGCAGCAGTATCGAGTTATTGCAACTCCTTTGCAAACTACAAACATGGGGCAACTAAATGCTTATCCTGTAAGTCAGAGTAATTCGCAACCTTCTTACAACGCTCAACCGAATGTCATTTATTTTGGTCAGTCTGGACAAACGCAGCAACAATTACCACTGCAACAACCTTACCATCCAGAAACACAACAACAAGTAGGTCAGGTGATATATGCAAGACCAGCCAGTCAGTCTTACGCTCCTCCAGGAACTGCCTATCCAACTCAAGCACAATTTACACAACAGCCTGACACAGGCACATTATCTTTTCAACCAA-CAATCAGCTGACACCTTCGTCCCAGCC-ATCACTATTCAGCCC-ATCATCAGGTAATCAAACACCCAGCAGAATTTAATCAGGCTCAAGATTCCACAC] [+] EMBL AI976856 [TTGCTTCACTTATTCTGAGGACATAAGTCGAATCATAACTTTTTAGTATTTCGGTTATTTGGATACAGTAGTGTTGCTTCTTTGGATTTCGGTGACGACAATCATGGCATCACCAGACGTTGGTATGGCGTATCACACACCTTCTCAAATAAGTCCTCAGAGTGGTAATATGACAACATCAACTAAAGTGCTCAATCTTTCGAGGGCCCAAGTCAACTTGGCTCAACCAGCATATGGTGCTTATCCAACATCAGTATCCCCACAACAATCCACTCCGACAAATGCTTATAATTATTCAAATCAACAAAGTCAATCACCCTCATTTTATGCTTATCCTAGTCAGACAGGATTTGAACAACCTGATAGCAACTTTAATAAACCAGGTTTTCAAAATTTTGCGCAACCTCAAGTTTTTACAATTGGTTCTAATCAAGCGTCTCAAATGCAGCCAACTCAGTATCGACAGCAAATTCAACAGCCTCAGCAACCGCAGCAGTATCGAGTTATTGCAACTCCTTTGCAAACTACAAACATGGGGCAACTAAAT ] [+] EMBL CD194902 [ GGATACAGTAGTGTTGCTTCTTTGGATTTCGGTGACGACAATCATGGCATCACCAGACGTTGGTATGGCGTATCACACACCTTCTCAAATAAGTCCCCAGAGTGGTAATATGACAACATCAACTAAAGTGCTCAATCTTTCGAGGGCCCAAGTCAACTTGGCTCAACCAGCATATGGTGCTTGTCCAACATCAGTATCCCCACAACAATCCACTCCGACAAATGCTTATAATTATTCAAATCAAC ] [-] EMBL CD178347 [ TGACGACAATCATGGCATCACCAGACGTTGGTATGGCGAATCACACACCTTCTCAAATAAGTCCTCAGAGTGGTAATATGACAACATCAACTAAAGTGCTCAATCTTTCGAGGGCCCAAGTCAACTTGGCTCAACCAGCATATGGTGCTTATCCAACATCAGTATCCCCACAACAATCCACTCCGACAAATGCTTATAATTATTCAAATCAACAAAGTCAATCACCCTCATTTTATGCTTATCCTAGTCAGACAGGATTTGAACAACCTGATAGCAACTTTAATAAACCAGGTTTTCAAAATTTTGCGCAACCTCAAGTTTTTACAATTGGTTCTAATCAAGCGTCTCAAATGCAGCCAACTCAGTATCGACAGCAAATTCAACAGCCTCAGCAACCGCAGCAGTATCGAGTTATTGCAACTCCTTTGCAAACTACAAACATGGGGCAACTAAATGCTTATCCTGTAAGTCAGAGTAATTCGCAACCTTCTTACAACGCTCAACCGAATGTCATTTATTTTGGTCAGTCTGGACAAACGCATCAACAATTACCACTGCAACAACCTT CCATCtc ] [+] EMBL CD178160 [ CAACTAAAGTGCTCAATCTTTCGAGGGCCCAAGTCAACTTGGCTCAACCAGCATATGGTGCTTATCCAACATCAGTATCCCCACAACAATCCACTCCGACAAATGCTTATAATTATTCAAATCAACAAAGTCAATCACCCTCATTTTATGCTTATCCTAGTCAGACAGGATTTGAACAACCTGATAGCAACTTTAATAAACCAGGTTTTCAAAATTTTGCGCAACCTCAAGTTTTTACAATTGGTTCTAATCAAGCGTCTCAAATGCAGCCAACTCAGTATCGACAGCAAATTCAACAGCCTCAGCAACCGCAGCAGTATCGAGTTATTGCAACTCCTTTGCAAACTACAAACATGGGGCAACTAAATGCTTATCCTGTAAGTCAGAGTAATTCGCAACCTTCTTACAACGCTCAACCGAATGTCATTTATTTTGGTCAGTCTGGACAAACGCAGCAACAATTACCACTGCAACAACCTTACCATCCAGAAACACAACAACAAGTAGGTCAGGTGATATATGCAAGACCAGCCAGTCAGTCTTACGCTCCTCCAGGAACTGCCTATCCAACTCAAGCACAATTTACACAACAGCCTGACACAGGCACATTATCTTTTCAACCAA CAATCAGCTGACACCTTCGTCCCAGCC ATCACTATTCAGCCC ATCATCAGGTAATCAAACACCCAGCAGAATTTAATCAGGCTCAAGATTCCACAC] [+] EMBL CD178161 [ CAACTAAAGTGCTCAATCTTTCGAGGGCCCAAGTCAACTTGGCTCAACCAGCATATGGTGCTTATCCAACATCAGTATCCCCACAACAATCCACTCCGACAAATGCTTATAATTATTCAAATCAACAAAGTCAATCACCCTCATTTTATGCTTATCCTAGTCAGACAGGATTTGAACAACCTGATAGCAACTTTAATAAACCAGGTTTTCAAAATTTTGCGCAACCTCAAGTTTTTACAATTGGTTCTAATCAAGCGTCTCAAATGCAGCCAACTCAGTATCGACAGCAAATTCAACAGCCTCAGCAACCGCAGCAGTATCGAGTTATTGCAACTCCTTTGCAAACTACAAACATGGGGCAACTAAATGCTTATCCTGTAAGTCAGAGTAATTCGCAACCTTCTTACAACGCTCAACCGAATGTCATTTATTTTGGTCAGTCTGGACAAACGCAGCAACAATTACCACTGCAACAACCTTACCATCCAGAAACACAACAACAAGTAGGTCAGGTGATATATGCAA ] [+] EMBL CD166944 [ CTAAAGTGCTCAATCTTTCGAGGGCCCAAGTCAACTTGGCTCAACCAGCATATGGGGCTTATCCAACATCAGTATCCCCACAACAATTCACTCCGACAAATGCTTATAATTATTCAAATCAACAAAGTCAATCACCCTCATTTTATGCTTATCCTAGTCGGACAGGATTTGAACAAC ] [-] EMBL CD123079 [ AACTCAGTATCGACAGCAAGTTCAACAGCCTCAGCAACCGCAGCAGTATCGAGTTATTGCAACTCCTTTGCAAACTACAAACATGGGGCAAGTAAATGCTTATCCTGTAAGTCAGAGTAATTCGCAACCTTCTTACAACGCTCAACCGAATGTCATTTATTTTGGTCAGTCTGGACAAACGCAGCAACAATTACCACTGCAACAACCTTACCATCCAGAAACACAACAACAAGTAGGTCAGGTGATATATGCAAGACCAGCCAGTCAGTCTTACGCTCCTCCAGGAACTGCCTATCCAACTCAAGCACAATTTACACAACAGCCTGACACAGGCACATTATCTTTTCAACCAACCAATCAGCTGACACCTTCGTCCCAGCCAATCACTATTCAGCCCAATCATCAGG ] [+] EMBL CD131095 [ CAGTATCGAGTTATTGCAACTCCTTTGCAAACTACAAACATGGGGCAACTAAATGCTTATCCTGTAAGTCAGAGTAATTCGCAACCTTCTTACAACGCTCAACCGAATGTCATTTATTTTGGTCAGTCTGGACAAACGCAGCAACAATTACCACTGCAACAACCTTACCATCCAGAAACACAACAACAAGTAGGTCAGGTGATATATGCAAGACCAGCCAGTCAGTCTTACGCTCCTCCAGGAACT ] [-] EMBL CD161056 [ ATCCTGTAAGTCAGAGTAATTCGCAACCTTCTTACAACGCTCAACCGAATGTCATTTATTTTGGTCAGTCTGGACAAACGCAGCAACAATTACCACTGCAACAACCTTACCATCCAGAAACACAACAACAAGTAGGTCAGGTGATATATGCAAGACCAGCCAGTCAGTCTTACGCTCCTCCAGGAACTGCCTATCCAACTCAAGCACAATTTACACAACAGCCTGACACAGGCACATTATCTTTTCAACCAACCAATCAGCTGACACCTTCGTCCCAGCCAATCACTATTCAGCCCAATCATCAGG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||