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Schistosoma mansoni
cluster # 9441 cluster # 9441       Sequences # 9       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9441#0 length = 967 sequences # 2  
consensus_9441#1 length = 923 sequences # 2  
consensus_9441#2 length = 530 sequences # 2  
consensus_9441#3 length = 439 sequences # 1  
consensus_9441#4 length = 369 sequences # 1  
consensus_9441#5 length = 262 sequences # 1  

consensusID : consensus_9441#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 967
fasta sequence
                              [CATCACCTGATGCTCATGTCAGAGATGTAAATATATATGTCTTCAGACAAACTGGGCCTCATCGTTTGAACTTTTTTGTAAGTTATTACAAATTCGGTGTCCCCTTCTTTTTCATAATAGACTAAAGTGAAACATAGTAAGCATGTATTTCTCTGCATTTCAGTTAACTCATAGTTATTATTGTCATAACAAATAGGACTTAATAGGTGTTCAAATATTCCTTGGAGAAACAAACTTTGAATATGTGACCATGGACGACATTTTTTCTGATGATCAGTTGCATTACTGTTCATTTCAAATAGGAATGTAAAAACAAACACATCATATTACATTTAACACTCCTAATAGAGTAAACAGTTGATATAATTTTGTTACTAGTTAGAAAATAGGCAACTTATAGTTTACTTTTCCATTATCAGAAGGGGTTTTTGTGGAGATTTAGTATTTTCATATTTGAAAGCGTCAGTCAATTGAAGGTAGACCACCACCCTGGTAGTGGTGAAATGTTTATTTCATAAATAATCCATTAAACACACTTTTCAGGATTATAAGAGAGGCTCTAGGAATTACAAGGTTATATTATAACTCTATATAACGAACCTAATACAATGAATAAAGTTGAAGGAATATTGGTTGCTTTGTGACAATCATTTTTTATCCTTGGTTAGTTATTTGTGATTTGTTAAGTAACTCTTGATCATAATATACCAGTTAGGTATTTTTTTTTGTATGGTCAGCCTTGATTCCATAGTATATATATACATAGTCAGTTGGATACTTTTTCATCTTTTAAGATCCGTTCTATTCGTGAATTGAGGATTTGTCTCATGAACAAATCATCAATGGAGTCAGTCATCGTAGTATTTTATCAAATCAATTTTTTTAACTACCGAGACAATATTGTAGTGTTATGTACATTGTGTTTTTGTAAAAATATTCTAATTACGTATGTTAATATAGAAAGTCG]

[+] EMBL CD078527             [CATCACCTGATGCTCATGTCAGAGATGTAAATATATATGTCTTCAGACAAACTGGGCCTCATCGTTTGAACTTTTTTGTAAGTTATTACAAATTCGGTGTCCCCTTCTTTTTCATAATAGACTAAAGTGAAACATAGTAAGCATGTATTTCTCTGCATTTCAGTTAACTCATAGTTATTATTGTCATAACAAATAGGACTTAATAGGTGTTCAAATATTCCTTGGAGAAACAAACTTTGAATATGTGACCATGGACGACATTTTTTCTGATGATCAGTTGCATTACTGTTCATTTCAAATAGGAATGTAAAAACAAACACATCATATTACATTTAACACTCCTAATAGAGTAAACAGTTGATATAATTTTGTTACTAGTTAGAAAATAGGCAACTTATAGTTTACTTTTCCATTATCAGAAGGGGTTTTTGTGGAGATTTAGTATTTTCATATTTGAAAGCGTCAGTCAATTGAAGGTAGACCACCACCCTGGTAGTGGTGAAATGTTTATTTCATAAATAATCCATTAAACACACTTTTCAGGATTATAAGAGAGGCTCTAGGAATTACAAGGTTATATTATAACTCTATATAACGAACCTAATAC                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD072996             [                                                                                                                                                                                                                                                                                                                                                                                                                                            TTGTGGAGATTTAGTATTTTCATATTTGAAAGCGTCAGTCAATTGAAGGTAGACCACCACCCTGGTAGTGGTGAAATGTTTATTTCATAAATAATCCATTAAACACACTTTTCAGGATTATAAGAGAGGTTCTAGGAATTACAAGGTTATATTATAACTTTATATAACGAACTTAATACAATGAATAAAGTTGAAGGAATATTGGTTGCTTTGTGACAATCATTTTTTATCCTTGGTTAGTTATTTGTGATTTGTTAAGTAACTCTTGATCATAATATACCAGTTAGGTATTTTTTTTTGTATGGTCAGCCTTGATTCCATAGTATATATATACATAGTCAGTTGGATACTTTTTCATCTTTTAAGATCCGTTCTATTCGTGAATTGAGGATTTGTCTCATGAACAAATCATCAATGGAGTCAGTCATCGTAGTATTTTATCAAATCAATTTTTTTAACTACCGAGACAATATTGTAGTGTTATGTACATTGTGTTTTTGTAAAAATATTCTAATTACGTATGTTAATATAGAAAGTCG]


>consensus_9441#0 CATCACCTGATGCTCATGTCAGAGATGTAAATATATATGTCTTCAGACAAACTGGGCCTC ATCGTTTGAACTTTTTTGTAAGTTATTACAAATTCGGTGTCCCCTTCTTTTTCATAATAG ACTAAAGTGAAACATAGTAAGCATGTATTTCTCTGCATTTCAGTTAACTCATAGTTATTA TTGTCATAACAAATAGGACTTAATAGGTGTTCAAATATTCCTTGGAGAAACAAACTTTGA ATATGTGACCATGGACGACATTTTTTCTGATGATCAGTTGCATTACTGTTCATTTCAAAT AGGAATGTAAAAACAAACACATCATATTACATTTAACACTCCTAATAGAGTAAACAGTTG ATATAATTTTGTTACTAGTTAGAAAATAGGCAACTTATAGTTTACTTTTCCATTATCAGA AGGGGTTTTTGTGGAGATTTAGTATTTTCATATTTGAAAGCGTCAGTCAATTGAAGGTAG ACCACCACCCTGGTAGTGGTGAAATGTTTATTTCATAAATAATCCATTAAACACACTTTT CAGGATTATAAGAGAGGCTCTAGGAATTACAAGGTTATATTATAACTCTATATAACGAAC CTAATACAATGAATAAAGTTGAAGGAATATTGGTTGCTTTGTGACAATCATTTTTTATCC TTGGTTAGTTATTTGTGATTTGTTAAGTAACTCTTGATCATAATATACCAGTTAGGTATT TTTTTTTGTATGGTCAGCCTTGATTCCATAGTATATATATACATAGTCAGTTGGATACTT TTTCATCTTTTAAGATCCGTTCTATTCGTGAATTGAGGATTTGTCTCATGAACAAATCAT CAATGGAGTCAGTCATCGTAGTATTTTATCAAATCAATTTTTTTAACTACCGAGACAATA TTGTAGTGTTATGTACATTGTGTTTTTGTAAAAATATTCTAATTACGTATGTTAATATAG AAAGTCG



consensusID : consensus_9441#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 923
fasta sequence
                              [CGGCACGAGGTTTTTTTTTACAACTTATAACTATAATCAACTGAAAATATATCTCAATACAATGAATTATGAACACATTTTCTCATAGATTAAGTAGTATACAGTTGAGATGATGGGGTTTTTTTTTAAATAGTTACATTGTAATTGTCATACAAAATTTCGTTTGGAAATCAAAATTGAATACTAAATATCAATCAAGTACCATATCAAATCATATCACTCATTGCCAATATTACAAATGATACATAAATGTCATCAAATGAACTGTACAATTTCATATTAACTATTTATGAAAACCTACTTATACTACTGAAATGAGTTGATGAAAGTAATAGTAGAAGGTATATGAAGTTACAACACTATAGTAGGACAAGAAGAACAACAAAATAGTCAGTCAGTCACAACGTAAAACTTCGTACGTACGTACGTACGTACATCAGTTGGAGTTGTCATACCACAACAAAATATATTTTGACTAAATCTAATTATAAACAAGAAGAATAGAAATAGGTCTAAGAAAATAATAAACGTAAGAATTTTAGAACAAAATAACCACCAAATGTGATATAAAGTACTTTATCCATTAGCTGACGTCTAGTTAATTCAAGTTCTATTTCATTGATACGATTCTCTAAT-ATCTAATACGTCGTGTATCTACAACAATTGATTGGGCATTACTTGTTTGATTCG-TAATAGTGACGAT-GATGATGTTGATGTAAATGTAAATGAATGATTC-ATANCATTGGAGACATTCGAT-AAGG-AGTGGAGAAGATGGGGGTTCTGTT-GGACATGA-TTCTGAAATTCAATGTTATGANNTGAAAATTGTGTNCTATTTCTCTTTTCAAAANTAAACCGTCTAATCGGATATGAACTCTTTATTCTAAAAAATGGTATGGTCTAAACTTGTGAAGGAACCGGTCCAA]

[+] EMBL CD080130             [CGGCACGAGGTTTTTTTTTACAACTTATAACTATAATCAACTGAAAATATATCTCAATACAATGAATTATGAACACATTTTCTCATAGATTAAGTAGTATACAGTTGAGATGATGGGGTTTTTTTTTAAATAGTTACATTGTAATTGTCATACAAAATTTCGTTTGGAAATCAAAATTGAATACTAAATATCAATCAAGTACCATATCAAATCATATCACTCATTGCCAATATTACAAATGATACATAAATGTCATCAAATGAACTGTACAATTTCATATTAACTATTTATGAAAACCTACTTATACTACTGAAATGAGTTGATGAAAGTAATAGTAGAAGGTATATGAAGTTACAACACTATAGTAGGACAAGAAGAACAACAAAATAGTCAGTCAGTCACAACGTAAAACTTCGTACGTACGTACGTACGTACATCAGTTGGAGTTGTCATACCACAACAAAATATATTTTGACTAAATCTAATTATAAACAAGAAGAATAGAAATAGGTCTAAGAAAATAATAAACGTAAGAATTTTAGAACAAAATAACCACCAAATGTGATATAAAGTACTTTATCCATTAGCTGACGTCTAGTTAATTCAAGTTCTATTTCATTGATACGATTCTCTAAT ATCTAATACGTCGTGTATCTACAACAATTGATTGGGCATTACTTGTTTGATTCG TAATAGTGACGAT GATGATGTTGATGTAAATGTAAATGAATGATTC ATANCATTGGAGACATTCGAT AAGG AGTGGAGAAGATGGGGGTTCTGTT GGACATGA TTCTGAAATTCAATGTTATGANNTGAAAATTGTGTNCTATTTCTCTTTTCAAAANTAAACCGTCTAATCGGATATGAACTCTTTATTCTAAAAAATGGTATGGTCTAAACTTGTGAAGGAACCGGTCCAA]
[-] EMBL CD083958             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gAAATCTAATCATAAACAAGAAGAATAGAAATAGGTCTAAGAAAATAAGAAACGTAAGAATTGTAGAACAAAATAACCACCAAATGTGATATAAAGTACTTTATCCATTAGCTGACGTCTAGTTAATTCAAGTTCTATTTCATTGATACGATTCTCTAATAATCTAATACGTCGTGTATCTACAACAATTGATTGGGCATTACTTGTTTGATTCGTTAATAGTGACGATAGATGATGATGATGTAGATGTAGATGAATGATTCAATAACATTGGAGACATTCGATAAAGGAAGTGGAGAAGATTGTGGTTCTGTTGGGACATGAGTTCTGcctcg                                                                                                                        ]


>consensus_9441#1 CGGCACGAGGTTTTTTTTTACAACTTATAACTATAATCAACTGAAAATATATCTCAATAC AATGAATTATGAACACATTTTCTCATAGATTAAGTAGTATACAGTTGAGATGATGGGGTT TTTTTTTAAATAGTTACATTGTAATTGTCATACAAAATTTCGTTTGGAAATCAAAATTGA ATACTAAATATCAATCAAGTACCATATCAAATCATATCACTCATTGCCAATATTACAAAT GATACATAAATGTCATCAAATGAACTGTACAATTTCATATTAACTATTTATGAAAACCTA CTTATACTACTGAAATGAGTTGATGAAAGTAATAGTAGAAGGTATATGAAGTTACAACAC TATAGTAGGACAAGAAGAACAACAAAATAGTCAGTCAGTCACAACGTAAAACTTCGTACG TACGTACGTACGTACATCAGTTGGAGTTGTCATACCACAACAAAATATATTTTGACTAAA TCTAATTATAAACAAGAAGAATAGAAATAGGTCTAAGAAAATAATAAACGTAAGAATTTT AGAACAAAATAACCACCAAATGTGATATAAAGTACTTTATCCATTAGCTGACGTCTAGTT AATTCAAGTTCTATTTCATTGATACGATTCTCTAATATCTAATACGTCGTGTATCTACAA CAATTGATTGGGCATTACTTGTTTGATTCGTAATAGTGACGATGATGATGTTGATGTAAA TGTAAATGAATGATTCATANCATTGGAGACATTCGATAAGGAGTGGAGAAGATGGGGGTT CTGTTGGACATGATTCTGAAATTCAATGTTATGANNTGAAAATTGTGTNCTATTTCTCTT TTCAAAANTAAACCGTCTAATCGGATATGAACTCTTTATTCTAAAAAATGGTATGGTCTA AACTTGTGAAGGAACCGGTCCAA



consensusID : consensus_9441#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 530
fasta sequence
                              [CCGCACAGATCCACTACAGCCAGTTAGTAACACTCAGCACCATAATTGCGCAAGTTGAAGCGGACGCAGAAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGTAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGTTCGGTGAGACATTGGGGCAAGTTGAAGCGGACGCAGATAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCGGAGACTGCAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTCGTTTTCCATATCAGATTCTTCGACTTCTTGCATNTGTGCCGATTCTTCAGATGTTNTCTCTG]

[+] EMBL CD144283             [CCGCACAGATCCACTACAGCCAGTTAGTAACACTCAGCACCATAATTGCGCAAGTTGAAGCGGACGCAGAAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGTAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGTTCGGTGAGACATTGGGGCAAGTTGAAGCGGACGCAGATAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGA                                                                                                                                                                ]
[+] EMBL CD201094             [                                                             GGACGCAGAAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGCAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAATTGGTGAAGGCGTATTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGTTCGGTGAGACATTGGGGCAAGTTGAAGCGGACGCAGAAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCGGAGACTGCAGCACAACCGGAACGGGAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTCGTTTTCCATATCAGATTCTTCGACTTCTTGCATNTGTGCCGATTCTTCAGATGTTNTCTCTG]


>consensus_9441#2 CCGCACAGATCCACTACAGCCAGTTAGTAACACTCAGCACCATAATTGCGCAAGTTGAAG CGGACGCAGAAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCGCTC CAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGTAGCACAACCGGAACGGGAACGAT TGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTATTTG AAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGTTCGGTGAGACATTGGGGCAAGTTG AAGCGGACGCAGATAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTGTTCG CTCCAGTCGAATTGGAGTCTGAGGCGCTTGCGGAGACTGCAGCACAACCGGAACGGGAAC GATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTCGTTTTCCATATC AGATTCTTCGACTTCTTGCATNTGTGCCGATTCTTCAGATGTTNTCTCTG



consensusID : consensus_9441#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 439
fasta sequence
                              [AGGGTTGTGGTTGACTATTGTTCAGAAGTTCTATTGTAGGACGAGACAAATGTCGTATGCTTCCTGGTTCTTAGTGGTTGTCTAATTAATATCAGTCCGTGATGTAATCTGTAAAGCTATCATCCAGAAGTTATAGGTGTTTATTAACAGTTGTCTACGCAAAATACTTTGGACCCTTTGGCCAGACACTATCAGCAACATTCTGCTGTGAGAGAGCAAACCAGATTCCAGTTGAGGAAGAAATCAGGAAAAAACGCTGGAAGTTGATAGGACACACACTGCGGAAATCACCCAACTGCGTCACAAGACAAGCCTTCACATGGAATCCTGAAGGACAAGGGAGAAGCGGTAAACCTAAGAACACATTACGCCGAGAAATGGAGACAGACATGAGAAGAATGAACAAAAATTGGATAGAGCTAGAAAGGAAGGCCGAGGC]

[+] EMBL CD149109             [AGGGTTGTGGTTGACTATTGTTCAGAAGTTCTATTGTAGGACGAGACAAATGTCGTATGCTTCCTGGTTCTTAGTGGTTGTCTAATTAATATCAGTCCGTGATGTAATCTGTAAAGCTATCATCCAGAAGTTATAGGTGTTTATTAACAGTTGTCTACGCAAAATACTTTGGACCCTTTGGCCAGACACTATCAGCAACATTCTGCTGTGAGAGAGCAAACCAGATTCCAGTTGAGGAAGAAATCAGGAAAAAACGCTGGAAGTTGATAGGACACACACTGCGGAAATCACCCAACTGCGTCACAAGACAAGCCTTCACATGGAATCCTGAAGGACAAGGGAGAAGCGGTAAACCTAAGAACACATTACGCCGAGAAATGGAGACAGACATGAGAAGAATGAACAAAAATTGGATAGAGCTAGAAAGGAAGGCCGAGGC]


>consensus_9441#3 AGGGTTGTGGTTGACTATTGTTCAGAAGTTCTATTGTAGGACGAGACAAATGTCGTATGC TTCCTGGTTCTTAGTGGTTGTCTAATTAATATCAGTCCGTGATGTAATCTGTAAAGCTAT CATCCAGAAGTTATAGGTGTTTATTAACAGTTGTCTACGCAAAATACTTTGGACCCTTTG GCCAGACACTATCAGCAACATTCTGCTGTGAGAGAGCAAACCAGATTCCAGTTGAGGAAG AAATCAGGAAAAAACGCTGGAAGTTGATAGGACACACACTGCGGAAATCACCCAACTGCG TCACAAGACAAGCCTTCACATGGAATCCTGAAGGACAAGGGAGAAGCGGTAAACCTAAGA ACACATTACGCCGAGAAATGGAGACAGACATGAGAAGAATGAACAAAAATTGGATAGAGC TAGAAAGGAAGGCCGAGGC



consensusID : consensus_9441#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 369
fasta sequence
                              [TACACTTTGTTTTTTTGCAATTAAGTTAACATTGAAGGTAAAGCTTCCTTCATACTTTCAGCTTCTAGTTTTGCTTGGGGTTCAAGTGTCGAAGATTGTAAAAGTCTATAGATCGTCCAGAAAGCTGGTGTGTCAGAAGTTCAATGTATCAGAAATATCAGTGTTATGTTATTTCAAGTGAATCATTTGTTGAACTCACTCTACTACTTATTCAGTCTGGGTTGTTTAGCGCTAATTATCAATATTTCCGATTTTAAAAGGTTAGTCAATTTTCAACACTGCAAGTTCTCCAGAAAGTCGTTTTGGTACTCAATGAAGCTGAATAATAATCAGGCTAATTAAATAAGGTTCATGCATATGCTCAGCCAG]

[+] EMBL CD066652             [TACACTTTGTTTTTTTGCAATTAAGTTAACATTGAAGGTAAAGCTTCCTTCATACTTTCAGCTTCTAGTTTTGCTTGGGGTTCAAGTGTCGAAGATTGTAAAAGTCTATAGATCGTCCAGAAAGCTGGTGTGTCAGAAGTTCAATGTATCAGAAATATCAGTGTTATGTTATTTCAAGTGAATCATTTGTTGAACTCACTCTACTACTTATTCAGTCTGGGTTGTTTAGCGCTAATTATCAATATTTCCGATTTTAAAAGGTTAGTCAATTTTCAACACTGCAAGTTCTCCAGAAAGTCGTTTTGGTACTCAATGAAGCTGAATAATAATCAGGCTAATTAAATAAGGTTCATGCATATGCTCAGCCAG]


>consensus_9441#4 TACACTTTGTTTTTTTGCAATTAAGTTAACATTGAAGGTAAAGCTTCCTTCATACTTTCA GCTTCTAGTTTTGCTTGGGGTTCAAGTGTCGAAGATTGTAAAAGTCTATAGATCGTCCAG AAAGCTGGTGTGTCAGAAGTTCAATGTATCAGAAATATCAGTGTTATGTTATTTCAAGTG AATCATTTGTTGAACTCACTCTACTACTTATTCAGTCTGGGTTGTTTAGCGCTAATTATC AATATTTCCGATTTTAAAAGGTTAGTCAATTTTCAACACTGCAAGTTCTCCAGAAAGTCG TTTTGGTACTCAATGAAGCTGAATAATAATCAGGCTAATTAAATAAGGTTCATGCATATG CTCAGCCAG



consensusID : consensus_9441#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 262
fasta sequence
                              [TAACGATAAGGAATTTCGTAATTCATCATGAGTTTTTCCATCTTCAAATGAATATCATATGAAATATTTTCATGATAAGTTTCAGCCTCTTAATCCTTACTTACTTACTTACGCCTGTTACTCCCAATAGAGCATAGGCCGCCGACCGGCATTCTCCAATCCATACTATCCTGGGCCTTCCTTTCTATTTCTATCCAATTTTTGTTCATTTTTCTCATGTCTATCTCCATTTCTCGGCGTAATGTGTTCTTTGGTCTTCCTC]

[+] EMBL CD189969             [TAACGATAAGGAATTTCGTAATTCATCATGAGTTTTTCCATCTTCAAATGAATATCATATGAAATATTTTCATGATAAGTTTCAGCCTCTTAATCCTTACTTACTTACTTACGCCTGTTACTCCCAATAGAGCATAGGCCGCCGACCGGCATTCTCCAATCCATACTATCCTGGGCCTTCCTTTCTATTTCTATCCAATTTTTGTTCATTTTTCTCATGTCTATCTCCATTTCTCGGCGTAATGTGTTCTTTGGTCTTCCTC]


>consensus_9441#5 TAACGATAAGGAATTTCGTAATTCATCATGAGTTTTTCCATCTTCAAATGAATATCATAT GAAATATTTTCATGATAAGTTTCAGCCTCTTAATCCTTACTTACTTACTTACGCCTGTTA CTCCCAATAGAGCATAGGCCGCCGACCGGCATTCTCCAATCCATACTATCCTGGGCCTTC CTTTCTATTTCTATCCAATTTTTGTTCATTTTTCTCATGTCTATCTCCATTTCTCGGCGT AATGTGTTCTTTGGTCTTCCTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9441#1      ------------------------CGGCACGAGGTTTTTTTTTACAACTTATAACTATAA 36
consensus_9441#4      ------------------------------------------------------------
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      CATCACCTGATGCTCATGTCAGAGATGTAAATATATATGTCTTCAGACAAACTGGGCCTC 60
consensus_9441#2      ------------------------------------------------------------
consensus_9441#3      ------------------------------------------------------------
                                                                                  

consensus_9441#1      TCAACTGAAAATATATCTCAATACAATGAATTATGAACACATTTTCTCATAGATTAAGTA 96
consensus_9441#4      -------------------------------------TACACTTTGTTTTTTTGCAATTA 23
consensus_9441#5      ---------------------------------------------------TAACGATAA 9
consensus_9441#0      ATCGTTTGAACTTTTTTGTAAGTTATTACAAATTCGGTGTCCCCTTCTTTTTCATAATAG 120
consensus_9441#2      ------------------------------------------------------CCGCAC 6
consensus_9441#3      --------AGGGTTGTGGTTGACTATTGTTCAGAAGTTCTATTGTAGGACGAGACAAATG 52
                                                                                  

consensus_9441#1      --GTATACAGTTGAGATGATGGGGTTTTTTTTTAAATAGTTACATTGTAAT-TGTCATAC 153
consensus_9441#4      --AGTTAACATTGAA--GGTAAAGCTTCCTTC-ATACTTTCAGCTTCTAGT-TTTGCTTG 77
consensus_9441#5      --GGAATTTCGTAATTCATCATGAGTTTTTCC---ATCTTCAAAT---GAA-TATCATAT 60
consensus_9441#0      --ACTAAAGTGAAACATAGTAAGCATGTATTT---CTCTGCATTTCAGTTA-ACTCATAG 174
consensus_9441#2      --AGATCCACTACAGCCAGTTAGTAACACTCA---GCACCATAATTGCGCA-AGTTGAAG 60
consensus_9441#3      TCGTATGCTTCCTGGTTCTTAGTGGTTGTCTAATTAATATCAGTCCGTGATGTAATCTGT 112
                                                                                  

consensus_9441#1      AAAATTTCGT-TTGGAAATCAAAATTGAATACTAAATATCAATCAAG--TACCATATCAA 210
consensus_9441#4      GGGTTCAAGTGTCGAAGATTGTAAAAGTCTATAGATCGTCCAGAAAGC-TGGTGTGTCAG 136
consensus_9441#5      GAAATATTTTCATGATAAGTTTCA--GCCTCTTAATCCTTACTTACTT-ACTTACGCCTG 117
consensus_9441#0      TTATTATTGTCATAACAAATAGGA--CTTAATAGGTGTTCAAATATTC-CTTGGAGAAAC 231
consensus_9441#2      CGGACGCAGAAAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGT-CTGTGTTCGCT 119
consensus_9441#3      AAAGCTATCATCCAGAAGTTATAGGTGTTTATTAACAGTTGTCTACGCAAAATACTTTGG 172
                                                                                  

consensus_9441#1      ATCATATCACTCATTGCCAATATTACAAATGATACATAAATGTCATCAAATGAACTGTAC 270
consensus_9441#4      A--AGTTCAATG--TATCAGAAATATCAGTGTTATGTTATTTCAAGTGAATCATTTGTTG 192
consensus_9441#5      TTACTCCCAATAGAGCATAGGCCGCCGACCGGCATTC---TCCAATCCATACTATCCTGG 174
consensus_9441#0      AAACTTTGAATA-----TGTGACCATGGACGACATTTT-TTCTGATGATCAGTTGCATTA 285
consensus_9441#2      CCAGTCGAATTGGAGTCTGAGGCGCTTGCAGAGACTGTAGCACAACCGGAACGGGAACGA 179
consensus_9441#3      ACCCTTTGGCCA------GACACTATCAGCAACATTCTGCTGTGAGAGAGCAAACCA--- 223
                                                       *          *               

consensus_9441#1      AATTTCATATTAACTATTTATGAAAACCTACTTATACTAC-TGAAATGAGTTGA--TGAA 327
consensus_9441#4      AACTCACTCT--ACTACTTATTCAGTCTGGGTTGTTTAGC-GCTAATTA-TCAA--TATT 246
consensus_9441#5      GCCTTCCTTTCTATTTCTATCCAATTTTTGTTCATTTTTC-TCATGTCTATCTC--CATT 231
consensus_9441#0      CTGTTCATTTCAAATAGGAATGTAAAAACAAACACATCATATTACATTTAACAC--TCCT 343
consensus_9441#2      ---TTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTGGTGAAGGCGTA 236
consensus_9441#3      GATTCCAGTTGAGGAAGAAATCAGGAAAAAACGCTGGAAGTTGATAGGACACACACTGCG 283
                         *                                                        

consensus_9441#1      AGTAATAGTAGAAGGTATATGAAGTTACAACACTATAGTAGGACAAGAAGAACAACAAAA 387
consensus_9441#4      TCCGATTTTAAAAGGTTAGTCAATTTTCAACACTGCAAGTTCTCCAGAAAGTCGTTTTGG 306
consensus_9441#5      TCTCGGCGTAATGTGTTCTTTGGTCTTCCTC----------------------------- 262
consensus_9441#0      AAT-AGAGTAAACAGTTGATATAATTTTGTTACTAGTTAGAAAATAGGCAACTTATAGTT 402
consensus_9441#2      TTTGAAGGTGAGACGGAAGCCGAGTCGGCAGTCGAAGTGTTCGGTGAGACATTGGGGCAA 296
consensus_9441#3      GAAATCACCCAACTGCGTCACAAGACAAGCCTTCACATGGAATCCTGAAGGACAAGGGAG 343
                                    *                                             

consensus_9441#1      TAGTCAGTCAGTCACAACGTAAAACTTCGTACGTACGTACG-TACGTACATCAGTTGGAG 446
consensus_9441#4      TACTCAATGAAGCTGAATAATAATCAGGCTAATTAAATAAGGTTCATGCATATGCTCAGC 366
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      TACTTTTCCATTATCAGAAGGGGTTTTTGTGGAGATTTAGTATTTTCATATTTGAAAGCG 462
consensus_9441#2      GTTGAAGCGGACGCAGATAGTGAAGTGGTAGAACAGGTTGAATCGGAACGTGTGTCTGTG 356
consensus_9441#3      AAG-CGGTAAACCTAAGAACACATTACGCCGAGAAATGGAGACAGACATGAGAAGAATGA 402
                                                                                  

consensus_9441#1      TT-GTCATACCACAACAAAATATATTTTGACTAAATCTAATTATAAACAAGAAGAATAGA 505
consensus_9441#4      CA-G-------------------------------------------------------- 369
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      TC-AGTCAATTGAAGGTAGAC-CACCACCCTGGTAGTGGTGAAATGTTTATTTCATAAAT 520
consensus_9441#2      TTCGCTCCAGTCGAATTGGAGTCTGAGGCGCTTGCGGAGACTGCAGCACAACCGGAACGG 416
consensus_9441#3      ACAAAAATTGGATAGAGCTAGAAAGGAAGGCCGAGGC----------------------- 439
                                                                                  

consensus_9441#1      AATAGGTCTAAGAAAATAATAAACGTAAGAATTTTAGAACAAAATAACCACCAAATGTGA 565
consensus_9441#4      ------------------------------------------------------------
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      AATCCATTAAACACACTTTTCAGGATTATAAGAGAGGCTCTAGGAATTACAAGGTTATAT 580
consensus_9441#2      GAACGATTGGTTGAGCGTGTCGGTGAGATGGAGGCGGAATATGGTGAAGTTCGTTTTCCA 476
consensus_9441#3      ------------------------------------------------------------
                                                                                  

consensus_9441#1      TATAAAGTACTTTATCCATTAGCTGACGTCTAGTTAATTCAAGTTCTATTTCATTGATAC 625
consensus_9441#4      ------------------------------------------------------------
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      TATAACTCTATATAACGAACCTAATACAATGAATAAAGTTGAAGGAATATTGGTTGCTTT 640
consensus_9441#2      TATCAGATTCTTCGACTTCTTGCATNTGTGCCGATTCTTCAGATGTTNTCTCTG------ 530
consensus_9441#3      ------------------------------------------------------------
                                                                                  

consensus_9441#1      GATTCTCTAATATCTAATACGTCGTGTATCTACAACAATTGATTGGGCATTACTTGTTTG 685
consensus_9441#4      ------------------------------------------------------------
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      GTGACAATCATTTTTTATCCTTGGTTAGTTATTTGTGATTTGTTAAGTAACTCTTGATCA 700
consensus_9441#2      ------------------------------------------------------------
consensus_9441#3      ------------------------------------------------------------
                                                                                  

consensus_9441#1      ATTCGTAATAGTGACGATGATGATGTTG---ATGTAAATGTAAATGAATGATTCATANCA 742
consensus_9441#4      ------------------------------------------------------------
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      TAATATACCAGTTAGGTATTTTTTTTTGTATGGTCAGCCTTGATTCCATAGTATATATAT 760
consensus_9441#2      ------------------------------------------------------------
consensus_9441#3      ------------------------------------------------------------
                                                                                  

consensus_9441#1      TTGGAGACATTCGATAAGGAGTGGAGAAGATGGGGGTTCTGTTGGACATGATTCTGAAAT 802
consensus_9441#4      ------------------------------------------------------------
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      ACATAGTCAGTTGGATACTTTTTCATCTTTTAAGATCCGTTCTATTCGTGAATTGAGGAT 820
consensus_9441#2      ------------------------------------------------------------
consensus_9441#3      ------------------------------------------------------------
                                                                                  

consensus_9441#1      TCAATGTTATGANNTGAAAATTGTGTNCTATTTCTCTTTTCAAAANTAAACCGTCTAATC 862
consensus_9441#4      ------------------------------------------------------------
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      TTGTCTCATGAACAAATCATCAATGGAGTCAGTCATCGTAGTATTTTATCAAATCAATTT 880
consensus_9441#2      ------------------------------------------------------------
consensus_9441#3      ------------------------------------------------------------
                                                                                  

consensus_9441#1      GGATATGAACTCTTTATTCTAAAAAATGGTATGGTCTAAACTTGTGAAGGAACCGGTCCA 922
consensus_9441#4      ------------------------------------------------------------
consensus_9441#5      ------------------------------------------------------------
consensus_9441#0      TTTTAACTACCGAGACAATATTGTAGTGTTATGTACATTGTGTTTTTGTAAAAATATTCT 940
consensus_9441#2      ------------------------------------------------------------
consensus_9441#3      ------------------------------------------------------------
                                                                                  

consensus_9441#1      A-------------------------- 923
consensus_9441#4      ---------------------------
consensus_9441#5      ---------------------------
consensus_9441#0      AATTACGTATGTTAATATAGAAAGTCG 967
consensus_9441#2      ---------------------------
consensus_9441#3      ---------------------------
                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)