These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9548#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1017 fasta sequence [CCACCATTCCATCGTGACGAGATTACCAAACCACATATGGGCTATTTCGTGACTGATTACGGTTG-TGATAGCTTCTTTTGTTGCTGGAGACA-TTGTGTGTG-GATT-AGCTAG-TAAAAGTCTTTCACGAA-AAGTTATTAATCCCCAGTTTTCCATCGCACCACCACACATATTAGGGACTGCAAGTAAATCAATTTTGGGTAGTGGATACTCAATGCCAAAGTATTCCCCGTAAAATGGTAAACTATGACAAGCCACATTTAGGGCGAAAGAACCCTGGTTTTGTTCTGAGAGAAGACCTTTACGCGAATACACACGCACTAAAACTCCATTTTTGTCAACAGCCTCGGTATACTCAAGATCTCCAACAGCAAAAGCTACCAAATATGTTGACATCTTTGGAGTATCTTGGAAATGGAACACAACTATGTTTTCATCGTGTTCTACTTTTGATAAGAGAGGCATATTTGAAATAGCAGTCTTTCCTTTAGGAATGTGGAGTTTAATATCAAAAATTGACTTGAACTCTGGTTCATCCAAACATGGGAATACTTGTCGAGCGCCAGTAGCCTCAAAGTGTGTAGAGAGTAGATAATGCTCTTCTTCCCCAGAGATATATGAACTTCTATAGAAACCCTCCATTTTTTCACTTATTATGCCAGTATACTCCACTCTTAGTTTTCCCAAAGCCGATGCTAACGGTTCTCTAAGAATGAACGAAACCTGCTCATATTCCCGTTTCTCAATTACTTCAACATCAATTCCATTGAACGTAGCTTTACTTACTGAAATGTCTTTGGCGTTGAGTAATATTTGAGAAGTCTCTTCTTCAATAGATACAGATAAAGACAGGTTCCCAGTAAACCTGAAGCTCAGAAAGCATGGCTTGATTTCTATTTCATATCTTATAGGGATGACAGATCGGGGCAGTCGGTTAAAGACACAAGGCGCCATACCCGTAGGTGACGACAACCGCAAACCAGGATGACGGATTGAATCCGTGTCCGAGACAATATATTA] [+] EMBL CD183900 [CCACCATTCCATCGTGACGAGATTACCAAACCACATATGGGCTATTTCGTGACTGATTACGGTTG TGATAGCTTCTTTTGTTGCTGGAGACA TTGTGTGTG GATT AGCTAG TAAAAGTCTTTCACGAA AAGTTATTAATCCCCAGTTTTCCATCGCACCACCACACATATTAGGGACTGCAAGTAAATCAATTTTGGGTAGTGGATACTCAATGCCAAAGTATTCCCCGTAAAATGGTAAACTATGACAAGCCACATTTAGGGC ] [+] EMBL CD183905 [CCACCATTCCATCGTGACGAGATTACCAAACCACATATGGGCTATTTCGTGACTGATTACGGTTG TGATAGCTTCTTTTGTTGCTGGAGACA TTGTGTGTG GATT AGCTAG TAAAAGTCTTTCACGAA AAGTTATTAATCCCCAGTTTTCCATCGCACCACCACACATATTAGGGACTGCAAGTAAATCAATTTTGGGTAGTGGATACTCAATGCCAAAGTATTCCCCGTAAAATGGTAAACTATGACAAGCCACATTTAGGGC ] [+] EMBL CD183822 [CCACCATTCCATCGTGACGAGATTACCAAACCACATATGGGCTATTTCGTGACTGATTACGGTTG TGATAGCTTCTTTTGTTGCTGGAGACA TTGTGTGTG GATT AACTAG TAAAAGTCTTTCACGAA AAGTTATTAATCCCCAGTTTTCCATCGCACCACCACACATATTATGGACTGCAAGTAAATCAATTTTGGGTAGTGGATACTCAATGCCAAAGTATTCCCCGTAAAATGGTAAACTATGACAAGCCACATTTAGGGC ] [-] EMBL CD070019 [ GATTACCGAACCACATATGGGCTATTTCGTGACTGATTACGTTTGTTGATAGCTTCTTTTGTTGCTGGAGACATTTGTGTGTG GATTAAGCTAG TAAAAGTCTTTCACGAA AAGTTAGTAATCCCCAGTTTTCCATCGCACCACCACACATATTAGGGACTGCAAGTAAATCAATTTTGGGTAGTGGATACTCAATGCCAAAGTATTCCCCGTAAAATGGTAAACTATGACAAGCCACATTTAGGGCGAAAGAACCCTGGTTTTGTTCTGAGAGAAGACCTTTACGCGAATACACACGCACTAAAACTCCATTTTTGTCAACAGCCTCGGTATACTCAAGATCTCCAACAGCAAAAGCTACCAAATATGTTGACATCTTTGGAGTATCTTGGAAATGGAACACAACTATGTTTTCATCGTGTTCTACTTTTGATAAGAGAGGCATAGATGAAATAGCAGTCT ] [+] EMBL CD069969 [ ACCACATATTGTCTATTTCGTGACTGATTACGGTTG TGATAGCTTCTTTTGTTGCTGGAGACA TTGTGTGTG GATT AGCTAG TAAAAGTCTTTCACGAA AAGTTATTAATCCCCAGTTTTCCATCGCACCACCACACATATTAGGGACTGCAAGTAAATCAATTTTGGGTAGTGGATACTCAATGCCAAAGTATTCCCCGTAAAATGGTAAACTATGACAAGCCACATTTAGGGCGAAAGAACCCTGGTTTTGTTCTGAGAGAAGACCTTTACGCGAATACACACGCACTAAAACTCCATTTTTGTCAACAGCCTCGGTATACTCAAGATCTCCAACAGCAAAAGCTACCAAATATGTTGACATCTTTGGAGTATCTTGGAAATGGAACACAACTATGTTTTCATCGTGTTCTACTTTTGATAAGAGAGGCATATTTGAAATAGCAGT ] [+] EMBL CD069982 [ TGTGTGTGAGATT AGCTAGATAAAAGTCTTTCACGAACAAGTTATTAATCCCCAGTTTTCCATCGCACCACCACACATATTAGGGACTGCAAGTAAATCAATTTTGGGTAGTGGATACTCAATGCCAAAGTATTCCCCGTAAAATGGTAAACTATGACAAGCCACATTTAGGGCGAAAGAACCCTGGTTTTGTTCTGAGAGAAGACCTTTACGCGAATACACGCGCACTAAAACTCCATTTTTGTCAACAGCCTCGGTATACTCAAGATCTCCAACAGCAAAAGCTACCAAATATGTTGACATCTTTGGAGTATCTTGGAAATGGAACACAACTATGTTTTCATCGTGTTCTACTTTTGATAAGAGAGGCATATTTGAAATAGCAGT ] [-] EMBL CD194855 [ CACGAA AAGTTATTAATCCCCAGTTTTCCATCGCACCACCACACATATTAGGGACTGCAAGTAAATCAATTTTGGGTAGTGGATACTCAATGCCAAAGTATTCCCCGTA ] [+] EMBL CD168548 [ AATTTTGGGTAGTGGATACTCAATGCCAAAGTATTCCCCGTAAAATGGTAAACTATGACAAGCCACATTTAGGGCGAAAGAACCCTGGTTTTGTTCTGAGAGAAGACCTTTACGCGAATACACACGCACTAAAACTCCATTTTTGTCAACAGCCTCGGTATACTCAAGATCTCCAACAGCAAAAGCTACCAAATATGTTGACATCTTTGGAGTATCTTGGAAATGGAACACAACTATGTTTTCATCGTGTTCTACTTTTGATAAGAGAGGCATATTTGAGATAGCAGTCTTTCCTTTAGGAATGTGGAGTTTAATATCAAAAATTGACTTGAACTCTGGTTCATCCAAACATGGGAATACTTGTCGAGCGCCAGTAGCCTCAAAGTGTGTAGAGAGTAGATAATGCTCTTCTTCCCCAGAGATATATGAACTTCTATAGAAACCCTCCATTTTTTCACTTATTATGCCAGTATACTCCACTCTTAGTTTTCCCAAAGCCGATGCTAACGGTTCTCTAAGAATGAACGAAACCTGCTCATATTCCCGTTTCTCAATTACTTCAACATCAATTCCATTGAACGTAGCTTTACTTACTGAAATGTCTTTGGCGTTGAGTAATATTTGAGAAGTCTCTTCTTCAATAGATACAGATAAAGACAGGTTCCCAGTAAACCTG ] [-] EMBL CD087671 [ GAGAGTAGATAATGCTCTTCTTCCCCAGAGATATATGAACTTCTATAGAAACCCTCCATTTTTTCACTTATTATGCCAGTATACTCCACTCTTAGTTCTCCCAAAGCCGATGCTAACGGTTCTCTAAGAATGAACGAAACCTGCTCATATTCCCGTTTCTCAATTACTTCAACATCAATTCCATTGAACGTAGCTTTACTTACTGAAATGTCTTTGGCGTTGAGTAATATTTGAGAAGTCTCTTCTTCAATAGATACAGATAAAGACAGGTTCCCAGTAAACCTGAAGCTCAGAAAGCATGGCTTGATTTCTATTTCATATCTTATAGGGATGACAGATCGGGGCAGTCGGTTAAAGACACAAGGCGCCATACCCGTAGGTGACGACAACCGCAAACCAGGATGACGGATTGAATCCGTGTCCG ] [-] EMBL CD184845 [ AGTAATATTTGAGAAGTCTCTTCTTCAATAGATACAGATAAAGACAGGTTCCCAGTAAACCTGAAGCTCAGAAAGCATGGCTTGATTTCTATTTCATATCTTATAGGGATGACAGATCGGGGCAGTCGGTTAAAGACACAAGGCGCCATATCTCTAGGTGACGACAACCGCAAACCAGGATGACGGATTGAATCCGTGTCACAGACAATATATTA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||