These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9596#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1304 fasta sequence [AGTTAGACAATAGTGAACCATTGTATGAATGTGTTATTTGTCAAATATCTGGTCGACCATCAGTAGATGACATGGTTCTTTTAGACATGATATGTGAATCGAATCTTATGCTTCAGCTTCGTGAAACTGCTGTGATACCAACATTATATGGACGAGATCTTAGCCACTCATCAGGTTATCCTCCAGTTCTTTCTGAGACTGACGACTTATCGTGGTTGTCACCGGAACGACCACCTGTTAGTGGCCCATTATTTCAAAATTCTCCGTTGAGTAATTCGACAAACTCTGATAATCCTTCTCCAGTTAGTGGTAGTAGTCAAGCTCCAGCAGGAATTGTTGGTCTACCGATTCATCCAATTACAACAAATTCTTCTATAAAATCACATACAGAACGTTCATCATCACCCAAACCTGAAACACTTTCTGGTAATAAACAATCAAAGCATCACTCATGCTATACTGAACATCGTCAATGGTGGAGTAATGCGATACCTTCTCTGATATCTAAAACATTACCACTACTACATTCTGGAATTTTATTACAAACTTGCGGTCATGTTGTTCATCGAGAATGTTTTCAGCGTTATCGTACACATGGAGGTAATCGTTCTGCTGCAACACGTCATCGTTCTTGGATTGTATGCCCTTTGTGTAGAAGAGATATTCATCATCTTTTACCATTAGTTCCATTGCCTAAATCTGGTACATTTGGCAATAAACAACAACTATTCCCTTCTGTAGAATATGGTCAACAGAATATTGCAATGCTTTTGAGTAGACTAAATTCATTATCTGACACTGGTTCAACATTTTGGAATGATTTAAATTGTTCCGAGGATGAGTTAAATGTTCAGCGTCGAATTCTGATGTCTCAACTAATTGGAAGTAATTATGAGGCTACCATACTATTAAGATGTCAACTAGAATGTGAACTTAGTGTTCTGATGAGTTATCCATCACAATATTCCATGGTATCTCGTCGGTGTTATTGGCGTGAATTTATTTGTTATCTCCGACAATATGTTTCCAGTGTTTGCTTTACTTCAGGATCCAGCCGATATTCTGCTCGGGCTACTACCTCACATATGGCCCCACGAAGGTATTTTTCATACTGTTTTGGCATCGACATTTTGTTTGGCTTATATACGTGCTCTTATCAGTGTTACATTTAATCGTTCCACTTCATCAACATGTTTTAATTTAGTCAAACAGATCAATAGGACAAAATATTTATTGGGTAAAATTTCTGGTGTTCTCAGGAAGCATTTAGAGAATTTACTTAATTATTTAAGTGAATTAAACAC] [-] EMBL CD180394 [AGTTAGACAATAGTGAACCATTGTATGAATGTGTTATTTGTCAAATATCTGGTCGACCATCAGTAGATGACATGGTTCTTTTAGACATGATATGTGAATCGAATCTTATGCTTCAGCTTCGTGAAACTGCTGTGATACCAACATTATATGGACGAGATCTTAGCCACTCATCAGGTTATCCTCCAGTTCTTTCTGAGACTGACGACTTATCGTGGTTGTCACCGGAACGACCACCTGTTAGTGGCCCATTATTTCAAAATTCTCCGTTGAGTAATTCGACAAACTCTGATAATCCTTCTCCAGTTAGTGGTAGTAGTCAAGCTCCAGCAGGAATTGTTGGTCTACCGATTCATCCAATTACAACTAATTCTTCTATAAAATCACTTACAGAACGTTCATCATCACCCAAACCTGAAACACTTTCTGGTAATAAACAATCAAAGCATCACTCATGCTA ] [+] EMBL CD065821 [ CTCTGATAATCCTTCTCCAGTTAGTGGTAGTAGTCAAGCTCCAGCAGGAATTGTTGGTCTACCGATTCATCCAATTACAACAAATTCTTCTATAAAATCACATACAGAACGTTCATCATCACCCAAACCTGAAACACTTTCTGGTAATAAACAATCAAAGCATCACTCATGCTATACTGAACATCGTCAATGGTGGAGTAATGCGATACCTTCTCTGATATCTAAAACATTACCACTACTACATTCTGGAATTTTATTACAAACTTGCGGTCATGTTGTTCATCGAGAATGTTTTCAGCGTTATCGTACACATGGAGGTAATCGTTCTGCTGCAACACGTCATCGTTCTTGGATTGTATGCCCTTTGTGTAGAAGAGATATTCATCATCTTTTACCATTAGCTCCATTGCCTAAATCTGGTACATTTGGCAATAAACAACAACTATTCCCTTCTGTAGAATATGGTCCACAGAATATTGCAATGCTTTTGAGTAGACTAAATTCATTATCTGACACTGGTTCAACA ] [+] EMBL CD065828 [ CTCTGATAATCC TCTCCAGTTAGTGGTAGTAGTCCAGCTCCAGCAGGAATTGTTGGTCTACCGATTCATCCAATTACAACAAATTCTTCTATAAAATCACATACAGAACGTTCATCATCACCCAAACCTGAAACACTTTCTGGTAATAAACAATCAAAGCATCACTCATGCTATACTGAACATCGTCAATGGTGGAGTAATGCGATACCTTCTCTGATATCTAAAACATTACCACTACTACATTCTGGAATTTTATTACAAACTTGCGGTCATGTTGTTCATCGAGAATGTTTTCAGCGTTATCGTACACATGGAGGTAATCGTTCTGCTGCAACACGTCATCGTTCTTGGATTGTATGCCCTTTGTGTAGAAGAGATATTCATCATCTTTTACCATTAGTTCCATTGCCTAAATCTGGTACATTTGGCAATAAACAACAACTATTCCCTTCTGTAGAATATGGTCAACAGAATATTGCAATGCTTTTGAGTAGACTAAAT ] [-] EMBL CD119252 [ TCAAAGCATCACTCATGCTATACTGAACATCGTCAATGGTGGAGTAATGCGATACCTTCTCTGATATCTAAAACATTACCACTACTACATTCTGGAATTTTATTACAAACTTGCGGTCATGTTGTTCATCGAGAATGTTTTCAGCGTTATCGTACACATGGAGGTAATCGTTCTGCTGCAACACGTCATCGTTCTTGGATTGTATGCCCTTTGTGTAGAAGAGATATTCATCATCTTTTACCATTAGTTCCATTGCCTAAATCTGGTACATTTGGCAATAAACAACAACTATTCCCTTCTGTAGAATATGGTCAACGGAATATTGCAATGCTTTTGAGTAGACTAAATTCATTATCTGACACTGGTTCAACATTTTGGAATGATTTAAATTGTTCCGAGGATGAGTTAAATGTTCAGCGTCGAATTCTGATGTCTCAACTAATTGGAAGTAATTATGAGGCTACCA ] [-] EMBL CD065861 [ GCTATACTGAACATCGTCAATGGTGGAGTAATGCGATACCTTCTCTGATATCTAAAACATTACCACTACTACATTCTGGAATTTTATTACAAACTTGCGGTCATGTTGTTCATCGAGAATGTTTTCAGCGTTATCGTACACATGGAGGTAATCGTTCTGCTGCAACACGTCATCGTTCTTGGATTGTATGCCCTTTGTGTAGAAGAGATATTCATCATCTTTTACCATTAGTTCCATTGCCTAAATCTGGTACATTTGGCAATAAACAACAACCAGTACGTTCTGTAG ] [-] EMBL CD119029 [ ACCTTCTCTGATATCTAAAACATTACCACTACTACATTCTGGAATTTTATTACAAACTTGCGGTCATGTTGTTCATCGAGAATGTTTTCAGCATTATCGTACACATGGAGGTAATCGTTCTGCTGCAACACGTCATCGTTCTTGGATTGTATGCCCTTTGTGTAGAAGAGATATTCATCATCTTTTACCATTAGTTCCATTGCCTAAATCTGGTACATTTGGCAATAAACAACAACTATTCCCTTCTGTAGAATATGGTCAACGGAATATTGCAATGCTTTTGAGTAGACTAAATTCATTATCTGACACTGGTTCAACATTTTGGAATGATTTAAATTGTTCCGAGGATGAGTTAAATGTTCAGCGTCGAATTCTGATGTCTCAACTAATTGGAAGTAATTATGAGGCTACCA ] [-] EMBL CD119007 [ TCTCTGATATCTAAAACATTACCACTACTACATTCTGGAATTTTATTACAAACTTGCGGTCATGTTGTTCATCGAGAATGTTTTCAGCGTTATCGTACACATGGAGGTAATCGTTCTGCTGCAACACGTCATCGTTCTTGGATTGTATGCCCTTTGTGTAGAAGAGATATTCATCATCTTTTACCATTAGTTCCATTGCCTAAATCTGGTACATTTGGCAATAAACAACAACTATTCCCTTCTGTAGAATATGGTCAACGGAATATTGCAATGCTTTTGAGTAGACTAAATTCATTATCTGACACTGATTCAACATTTTGGAATGATTTAAATTGTTCCGAGGATGAGTTAAATGTTCAGCGTCGAATTCTGATGTCTCAACTAATTGGAAGTAATTATGAGGCTACCA ] [-] EMBL CD148190 [ ACTACATTCTGGAATTTTATTACAAACTTGCGGTCATGTTGTTCATCGAGAATGTTTTCAGCATTATCGTACACATGGAGGTAATCGTTCTGCTGCAACACGTCATCGTTCTTGGATTGTATGCCCTTTGTG ] [+] EMBL CD065859 [ TATTACAAACTTGCGGTCATGTTGTTCATCGAGAATGTTTTCAGCGTTATCGTACACATGGAGGTAATCGTTCTGCTGCAACACGTCATCGTTCTTGGATTGTATGCCCTTTGTGTAGAAGAGATATTCATCATCTTTTACCATTAGTTCCATTGCCTAAATCTGGTACATTTGGCAATAAACAACAACTATTCCCTTCTGTAGAATATGGTCAACAGAATATTGCAATGCTTTTGAGTAGACTAAATTCATTATCTGACACTGGTTCAACATTTT ] [+] EMBL CD178500 [ ATGGTCAACAGAATATTGCAATGCTTTTGAGTAGACTAAATTCATTATCTGACACTGGTTCAACATTTTGGAATGATTTAAATTGTTCCGAGGATGAGTTAAATGTTCAGCGTCGAATTCTGATGTCTCAACTAATTGGAAGTAATTATGAGGCTACCATACTATTAAGATGTCAACTAGAATGTGAACTTAGTGTTCTGATGAGTTATCCATCACAATATTCCATGGTATCTCGTCGGTGTTATTGGCGTGAATTTATTTGTTATCTCCGACAATATGTTTCCAGTGTTTGCTTTACTTCAGGATCCAGCCGATATTCTGCTCGGGCTACTACCTCACATATGGCCCCACGAAGGTATTTTTCATACTGTTTTGGCATCGACATTTTGTTTGGCTTATATACGTGCTCTTATCAGTGTTACATTTAATCGTTCCACTTCATCAACATGTTTTAATTTAGTCAAACAGATCAATAGGACAAAATATTTATTGGGTAAAATTTCTGGTGTTCTCAGGAAGCATTTAGAGAATTTACTTAATTATTTAAGTGAATTAAACAC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||