These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9598#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1702 fasta sequence [CTACATCATGGCGAGGACGTATGACCAAGAACTGGCATTTCTGGAAAAGATCACCCCAACTTGTTGGAAAATCAAGAAAGGTTTTGTCCCAAACATGAATGTTGAAGGTGTTTTTTATGTGAATAACTTTCTCGAAAAGCTTATGTTTGACGAACTACGAAATTTTACCCGTAGTGGAGATTATGGTGGGTTCCTACCAGGTATGAAGCAAATAGGGAATGTTGCAGCGTTGCCTGGAATTGTCCATCGTTCAGTCGGCTTACCTGATGTACATTCTGGATATGGCTTTGCCATCGGTAATATGGCTGCATTTGACCTGACCAATCCAAAATCAGTAGTCTCACCCGGTGGTGTTGGATTCGATATCAATTGCGGAGTCCGACTTATACGCACAAATCTGAATTTAAAAGATGTTCTTCCAGTGAAAGAAAAGTTAACTCAGACTTTGTTTGATCATATTCCTGTTGGTGTTGGTTCCAAGGGTATCATACCGATGGATGCTCAAGCTCTGG-AAGAAGCTTTAGAAATGGGTATGGATTGGTCTTTGA-GACAAGGGTATGTCTGGGCGGAAGATAAGGAGCATTGTGAAGAGTATGGTCGTATGCTTCAG-GCTGATCCTTCTAAAGTTTCTTCACGAGCGAAAAAACGTGGTCTTCCGCAACTTGGGACTCTTGGAGCTGGTAATCATTACGCTGAGATACAAGTTGTAGAAGAAATTTTCGACAAACATGCAGCAACTAAAATGGGCATCAATCATTTAAATCAGGTAGTACTAATGATTCATTGTGGGAGTCGAGGAATGGGTCATCAAGTTGCAACAGATGCTTTGGTCGCCATGGAAAAAGCAATGAAACGTGATAAAATCGAAGTAAATGATCGACAGTTGGCCTGTGCACACATTAATTCTGAAGAAGGTCAAGATTATTTGAAAAGC-ATGGCAGCGGCTGCCAACTATGCCTGGGTTAATCGATCTTCTATGACATTTCTTGCAAGACAGGCTTTTGCGAAAATTTTCCATTCTACACCAGATGATTTAGATATGCAGATTATATATGATGTATCACATAATATCGCTAAGGTAGAAGAACATTGGGTAGATGGCAAAATAAAAACGTTATTAGTTCATCGTAAAGGATCTACTCGAGCATTTCCACCTCATCATCCCTTAATTCCTGTTGATTATCAGCTTACCGGGCAGCCTGTACTTATTGGTGGCACTATGGGTACTTGTAGTTATGTTTTAACTGGTACTGAAAAAGCAATGACTGAAACTTTTGGTTCCACATGTCATGGTGCTGGGTCGTGCATTATCTCGAGCCAAATCGAGACGTAATCTCGACTACACTGACGTTTTAGCACAGTTACAGGAAAAAGGTATATCAATACGGGTCGCTTCACCTAAACTTGTGATGGAAGAAGCTCCAGAGTCATATAAAAATGTAACAGATGTTGTAGATACCTGTCAAGCAGCTGGAATAAGTAACAAGGTGCTCAAATTACGTCCGATTGGAGTCATCAAAGGTTAACCCTGTTTTTTTGCACCGGTCGATACTTTCTTCCGCTTCCAACTAAATCCATGCATTCAATGCCTCTGTACACAAAATAAAATTGTTCTGTATACTATTTTTACTTGTTTGAACGGAAAAAAAATGTGATATTTTTAATTGTGTGATATTCACTACCAAATAAAATTATTATTACT] [-] EMBL CD116636 [CTACATCATGGCGAGGACGTATGACCAAGAACTGGCATTTCTGGAAAAGATCACCCCAACTTGTTGGAAAATCAAGAAAGGTTTTGTCCCAAACATGAATGTTGAAGGTGTTTTTTATGTGAATAACTTTCTCGAAAAGCTTATGTTTGACGAACTACGAAATTTTACCCGTAGTGGAGATTATGGTGGGTTCCTACCAGGTATGAAGCAAATAGGGAATGTTGCAGCGTTGCCTGGAATTGTCCATCGTTCAGTCGGCTTACCTGATGTACATTCTGGATATGGCTTTGCCATCGGTAATATGG ] [-] EMBL CD140242 [ ttGTGGAGATTATGGTGGGTTCCTACAAGGTATGAAGCAAATAGGGAATGTTGCAGCGTTGCCTGGAATTGTCCATCGTTCAGTCGGCTTACCTGATGTACATTCTGGATATGGCTTTGCCATCGGTAATATGGCTGCATTTGACCTGACCAATCCAAAATCAGTAGTCTCACCCGGTGGTGTTGGATTCGATATCAATTGCGGAGTCCGACTTATACGCACAAATCTGAATTTAAAAGATGTTCTTCCAGTGAAAGAAAAGTTAACTCAGACTTTGTTTGATCATATTCCTGTTGGTGTTGGTTCCAAGGGTATCATACCGATGGATGCTCAAGCTCTGG AAGAAGCTTTAGAAATGGGTATGGATT ] [+] EMBL CD114192 [ TAGGGAATGTTGCAGCGTTGCCTGGAATTGTCCATCGTTCAGTCGGCTTACCTGATGTACATTCTGGATATGGCTTTGCCATCGGTAATATGGCTGCATTTGACCTGACCAATCCAAAATCAGTAGTCTCACCCGGTGGTGTTGGATTCGATATCAATTGCGGAGTCCGACTTATACGCACAAATCTGAATTTAAAAGATGTTCTTCCAGTGAAAGAAAAGTTAACTCAGACTTTGTTTGATCATATTCCTGTTGGTGTTGGTTCCAAGGGTATCATACCGATGGATGCTCAAGCTCTGG AAGAAGCTTTAGAAATGGGTATGGATTGGTCTTTGA GACAAGGGTATGTCTGGGCGGAAGATAAGGAGCATTGTGAAGAGTATGGTCGTATGCTTCAG GCTGATCCTTCTAAAGTTTCTTCACGAGCGAAAGATCGTGGTCTTCCGCAACTTGGGACTCTTGGAGCTGGTAATCATTACGCTGAGATACAAGTTGTAGAAGAAATTTTCGACAAACATGCAGNCACTAAAATGGGCATCAATC ] [+] EMBL CD078659 [ CCGACTTATACGCACAAATCTGAATTTAAAAGATGTTCTTCCAGTGAAAGAAAAGTTAACTCAGACTTTGTTTGATCATATTCCTGTTGGTGTTGGTTCCAAGGGTATCATACCGATGGATGCTCAAGCTCTGG AAGAAGCTTTAGAAATGGGTATGGATTGGTCTTTGA GACAAGGGTATGTCTGGGCGGAAGATAAGGAGCATTGTGAAGAGTATGGTCGTATGCTTCAG GCTGATCCTTCTAAAGTTTCTTCACGAGCGAAAAAACGTGGTCTTCCGCAACTTGGGACTCTTGGAGCTGGTAATCATTACGCTGAGATACAAGTTGTAGAAGAAATTTTCGACAAACATGCAGCAACTAAAATGGGCATCAATCATTTAAATCAGGTAGTACTAATGATTCATTGTGGGAGTCGAGGAATGGGTCATCAAGTTGCAACAGATGCTTTGGTCGCCATGGAAAAAGCAATGAAACGTGATAAAATCGAAGTAAATGATCGACAGTTGGCCTGTGCACACATTAATTCTGAAGAAGGTCAAGATTATTTGAAAAGC ATGGCAGCGGCTGCCAACTATGCCTGGGTTAAT ] [+] EMBL CD137993 [ ATCTGAATTTAAAAGATGTTCTTCCAGTGAAAGAAAAGTTAACTCATACTTTGTTTGATCATATTCCTGTTGGTGGTGGTTCCAAGGGTATCATACCGATGGATGCTCGGGCTCTGG AGGAAGCTTTAGAAATGGGTATGGATTGGTCTTTGAta ] [+] EMBL CD083882 [ gTTGATCATATTCCTGTTGGTGTTGG TCCAAGGGTATCATACCGATGGATGCTCAAGCTCTGGCAAGAAGCTTTAGAAATGGGTATGGATTGGTCTTTGACGACAAGGGTATGTCTGGGCGGAAGATAAGGAGCATTGTGAAGAGTATGGTCGTATGCTTCAGTGCTGATCCTTCTAAAGTTTCTTCACGAGCGATAAAACGTGGTCTTCCGCAACTTGGGACTCTTGGAGCTGGTAATCATTACGCTGAGATACAAGTTGTAGAAGAAATTTTCGACAAACATGCAGCAACTAATATGGGCATCAATCATTTAAATCAGGTAGTACTAATGATTCATTGTGGGAGTCGAGGAATGGGTCATCAAGTTGCAACAGATGCTTTGGTCGCCATGGAAAAAGCAATGAAACGTGATAAAATCGAAGTAAATGATCGACAGTTGGGCT ] [+] EMBL CD197786 [ TGCTCAAGCTCTGG AAGAAGCTTTAGAAATGGGTATGGATTGGTCTTTGA GACAAGGGTATGTCTGGGCGGAAGATAAGGAGCATTGTGAAGAGTATGGTCGTATGCTTCAG GCTGATCCTTCTAAAGTTTCTTCACGAGCGAAAAAACGTGGTCTTCCGCAACTTGGGACTCTTGGAGCTGGTAATCATTACGCTGAGATACAAGTTGTAGAAGAAATTTTCGACAAACATGCAGCAACTAAAATGGGCATCAATCATTTAAATCAGGTAGTACT ATGATTCATTGTGGGAGTCGAGGAATGGGTCATCAAGTTGCAACAGATGCTTTGGTCGCCATGGAAAAAGCAATGAAACGTGATAAA ] [-] EMBL CD197554 [ GCTCAAGCTCTGG AAGAAGCTTTAGAAATGGGTATGGATTGGTCTTTGA GACAAGGGTATGTCTGGGCGGAAGATAAGGAGCATTGTGAAGAGTATGGTCGTATGCTTCAG GCTGATCCTTCTAAAGTTTCTTCACGAGCGAAAAAACGTGGTCTTCCGCAACTTGGGACTCTTGGAGCTGGTAATCATTACGCTGAGATACAAGTTGTAGAAGAAATTTTCGACAAACATGCAGCAACTAAAATGGGCATCAATCATTTAAATCAGGTAGTACTAATGATTCATTGTGGGAGTCGAGGAATGGGTCATCAAGTTGCAACAGATGCTTTGGTCGCCATGGAAAAAGCAATGAAACGTGATAAAA ] [+] EMBL BF936894 [ TTTCGACAAACATGCAGCAACTAAAATGGGCATCAATCATTTAAATCAGGTAGTACTAATGATTCATTGTGGGAGTCGAGGAATGGGTCATCAAGTTGCAACAGATGCTTTGGTCGCCATGGAAAAAGCAATGAAACGTGATAAAATCGAAGTAAATGATCGACAGTTGGCCTGTGCACACATTAATTCTGAAGAAGGTCAAGATTATTTG AAAGCAATGGCAGCGGCTGCCAACTATGCCTGGGTTAATCGATCTTCTATGACATTTCTTGCAAGACAGGCTTTTGCGAAAATTTTCCATTCTACACCAGATGATTTAGATATGCAGATTATATATGATGTATCACATAATATCGCTAAGGTAGAAGAACATTGGGTAGATGGCAAAATAAAAACGTTATTAGTTCATCGTAAAGGATCTACTCGAGCATTTCCACCTCATCATCCCTTAATTCCTGTTGATTATCAGCTTACCGGGCAGCCTGTACTTATTGGTGGCACTATGGGTACTTGTAGTTATGTTTTAACTGGTACTGAAAAAGCAATGACTGAAACTTTTGGTTCCACATGTCATGGTGCTGGGTCGTGCATTATCTCGAGCCAAATCGAGACGTAATCTCGACTACACTGACGTTTTAGCACAGTTACAGGAAAAAGGTATATCAATACGGGTCGCTTCACCTAAACTTGTGA ] [-] EMBL CD073122 [ GATGGCAAAATAAAAACGTTATTAGTTCATCGTAAAGGATCTACTCGAGCATTTCCACCTCATCATCCCTTAATTCCTGTTGATTATCAGCTTACCGGGCAGCCTGTACTTATTGGTGGCACTATGGGTACTTGTAGTTATGTTTTAACTGGTACTGAAAAAGCAATGACTGAAACTTTTGGTTCCACATGTCATGGTGCT GGTCGTGCATTATCTCGAGCCAAATCGAGACGTAATCTCGACTACACTGACGTTTTAGCACAGTTACAGGAAAAAGGTATATCAATACGGGTCGCTTCACCTAAACTTGTGATGGAAGAAGCTCCAGAGTCATATAAAAATGTAACAGATGTTGTAGATACCTGTCAAGCAGCTGGAATAAGTAACAAGGTGCTCAAATTACGTCCGATTGGAGTCATCAAAGGTTAACCCTGTTTTTTTGCACCGGTCGATACTTTCTTCCGCTTCCAACTAAATCCATGCATTCAATGCCTCTGTACACAAAATAAAATTGTTCTGTATACTATTTTTACTTGTTTGAACGGAAAAAAAATGTGATATTTTTAATTGTGTGATATTCACTACCAAATAAAATTATTATTACT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||