These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9616#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 728 fasta sequence [CTGTGAAAGATGTTGAGAAAAAATTAGAAGCGGATATAAAACTTCGTACTGAACTTGGTCCTATACGTTTCATGGAACAGGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT-ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA-CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCTAGTTTTTGGCGTGATCAACCACGT] [+] EMBL CD145460 [CTGTGAAAGATGTTGAGAAAAAATTAGAAGCGGATATAAAACTTCGTACTGAACTTGGTCCTATACGTTTCATGGAACAGGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT AC ] [-] EMBL CD200644 [ CTTCGTACTGAACTTGGTCCTATACGTTTCATGGAACAGGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGG ] [+] EMBL CD139230 [ GTTTCATGGAACAGGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGATCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCTAACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTT ] [+] EMBL CD115652 [ GGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAG AGGGGGGGGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGAC AAATAA TGGGCAGATTGAACGTCATTCAATAGCTATTTCTGGTCGATTACCGGCCTGCCAATGA ] [-] EMBL CD128004 [ ACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACATCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTG ] [+] EMBL CD096752 [ CCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGTTTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATTCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCT ] [+] EMBL CD096722 [ CCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGTTTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTCAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCT ] [+] EMBL CD112295 [ TCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCGAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGC ] [-] EMBL CD150330 [ CATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAATAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGTTTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTAGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCTAGTTTTTGGCGTGATCAACCACGT] [-] EMBL CD112600 [ GTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTGAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCTAGTTTTTGGCGTGATCAACCACGT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||