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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9616#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 728 fasta sequence
[CTGTGAAAGATGTTGAGAAAAAATTAGAAGCGGATATAAAACTTCGTACTGAACTTGGTCCTATACGTTTCATGGAACAGGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT-ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA-CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCTAGTTTTTGGCGTGATCAACCACGT]
[+] EMBL CD145460 [CTGTGAAAGATGTTGAGAAAAAATTAGAAGCGGATATAAAACTTCGTACTGAACTTGGTCCTATACGTTTCATGGAACAGGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT AC ]
[-] EMBL CD200644 [ CTTCGTACTGAACTTGGTCCTATACGTTTCATGGAACAGGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGG ]
[+] EMBL CD139230 [ GTTTCATGGAACAGGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGATCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCTAACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTT ]
[+] EMBL CD115652 [ GGCTGTGAGCCAATTAGCATCACAACAATCTAATATGCCTGAATCACTACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAG AGGGGGGGGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGAC AAATAA TGGGCAGATTGAACGTCATTCAATAGCTATTTCTGGTCGATTACCGGCCTGCCAATGA ]
[-] EMBL CD128004 [ ACGTCTTACAGCTGGCGGTCCAACTGCCACAGAAATGTCAGTCTATGAAGAATTCGGTCGCGTTATTCCTGGCTTTGCCCCGAGCTCATCTGGAGCCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACATCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTG ]
[+] EMBL CD096752 [ CCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGTTTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATTCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCT ]
[+] EMBL CD096722 [ CCATGGTGAATACGCCTTCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGTTTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTCAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCT ]
[+] EMBL CD112295 [ TCATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAACAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGGGTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCGAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGC ]
[-] EMBL CD150330 [ CATCATCCATCTTACTTCCTGTGTCTTTGAACCCACTAACTGCAGTTCAAAACATTTCTCCATCTACTGTAAATTCCGCAGCATCAATGGCTGCATATCTTCAGCTATCTGCATCACAGAAATAACAACTTTCTTCT ACTGGTATCGTTCAACGACAGACTACTCCTGCAATATGCACTGCTAGTGTTTCATTTCTGAAACCACAAGGTTATCCAACTCCAGCCAGTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTAGACAGATTGAACGTCATTTAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCTAGTTTTTGGCGTGATCAACCACGT]
[-] EMBL CD112600 [ GTCAACCATCAGCTAACTTTCAAGCCCCACTATCTGGTTTGTTTGACAAAATAAGTGGACAGATTGAACGTCATTGAATAGCTATTTCTGGTCGATTA CGTCCTGCCAATGATCCAATGTGCCAATCTCTACGTTGTTTAATTGATGCTGTTCACCTAGCTAAAACAAGTCGTGACCCAAATGTTGCCAACAATATTATTACAGTTATGGTACGAAGTTTCCTGGAGCATTATCGACCTAGTTTTTGGCGTGATCAACCACGT]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||