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Schistosoma mansoni
cluster # 9637 cluster # 9637       Sequences # 10       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9637#0 length = 1009 sequences # 10  

consensusID : consensus_9637#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1009
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTCGCTGGATAGGATAATACTCACAGATATTTACAAGCAATCTAGATGATTACATTGGTATGTTTACTTAGCGCTTGCGTTCAAATGGTGTGCTTTTGCGTTTGCTACCCAACGTTTTTCGAGCACGTGGACATCTGTTTCGCCGACGTTCAACCTCATGAAATAAATGGCCTTCCGGACACAACTTTCTTAATGATGACGATATCTCATTTGGCAATTGAAACGGGATATTCAAATTAACTTTTTTCAGTTTATCACGAGTCTCATTTTTAGCTTTGGCTGCTAACTTTCGCCTTTCCCTGGTTTTCTTTTCACGTTTGATTTCCTTAAGCAACTTAGGTAAATTTTCAAGATCGTTTTTCA--TTTTTTTTTGAGCGTCCATTTTTTTAGGCTTCTTGCGAGGCAGTAAAACCTCATCAACTTCTTCATTATTTTTTGTGACGTTTGACTCAGTATTTAATGAATGGAGGAACTTTTCCATATCTTTAAGAGGGTTCGGTGGCGACTTAACACCTCTTAGGCTGCTAACAAAGCGCTCTGTTTTAAGCTCTCGTTTTCGTTTTGCAGACTCGATAGTTTTTAGTCGTGAAATGAGGGATAAGTGGTCGTGCAAAGTAGGATTGTATGATTGTCCTGGACAAGGTAGGGAATGGTTTCCTGGATCCTTATCGACTGCGTTTTTCCCAGTGGACCCTTTACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCTTTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGGTCGCATGCGCTAGGGATATTGTTGAAAGGTTTCGCTGAATTCTTATCTCCCTTTACGATATCGTTTATTTTGCTTAGTGTTGACACTTGTGCAAAGTCGTGGTCAATTATTCTTTTGTGAATAACTGCGTCTTGGATTTTGGAATCGATATCCCTGTAGCAATATTGCCACCGCCTCTTTTTGTTTTTTCCAAG]

[+] EMBL AI395332             [TTTTTTTTTTTTTTTTTTTTTTTTTTCGCTGGATAGGATAATACTCACAGATATTTACAAGCAATCTAGATGATTACATTGGTATGTTTACTTAGCGCTTGCGTTCAAATGGTGTGCTTTTGCGTTTGCTACCCAACGTTTTTCGAGCACGTGGACATCTGTTTCGCCGACGTTCAACCTCATGAAATAAATGGCCTTCCGGACACAACTTTCTTAATGATGACGATATCTCATTTGGCAATTGAAACGGGATATTCAAATTAACTTTTTTCAGTTTATCACGAGTCTCATTTTTAGCTTTGGCTGCTAACTTTCGCCTTTCCCTGGTTTTCTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD116030             [                                                                                                                                                                         ACGTTCANCCTCATGAATTAAATGGCCTTCCGGACACAACTTTCTTAATGATGACGATATCTCATTTGGTAATTGAAACGGGATATTCAAATTAACTTTTTTCAGTTTATCACGAGTCTCATTTTTAGCTTTGGCTGCTAACTTTCGCCTTTCCCTGATTTTCTTTTCACGTTTGATTTCCTTAAGCAACTTAGGTAAATTTTCAAGATCGTTTTTCATTTTTTTTTTTGAGCGTCCATTTGTTTAGGCTTCTTGCGAGGCAGTAAAACCTCATCAACTTCTTCATTATTTTTTGTGACGTTTGACTCAGTATTTAATGAATGGAGGAACTTTTCCATATCTTTAAGAGGGTTCGGTGGCGGCTTAACACCTCTTAGGCTGCTAACAAAGCGCTCTGTTTTAAGCTCTCGTTTTCGTTTTGCAGACTCGATAGTTTTTA TCGTGAAATGAGGGATAAGTGGTCGTGCAAAGTAGG                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD116845             [                                                                                                                                                                                                                                                                                                                                                                                      AGATCGTTTTTCA  TTTTTTTTTGAGCGTCCATTTTTTTAGGCTTCTTGCGAGGCAGTAAAACCTCATCAACTTCTTCATTATTTTTTGTGACGTTTGACTCAGTATTTAATGAATGGAGGAACTTTTCCATATCTTTAAGAGGGTTCGGTGGCGACTTAACACCTCTTAGGCTGCTAACAAAGCGCTCTGTTTTAAGCTCTCGTTTTCGTTTTGCAGACTCGATAGTTTTTAGTCGTGAAATGAGGGATAAGTGGTCGTGCAAAGTAGGATTGTATGATTGTCCTGGACAAGGTAGGGAATGGTTTCCTGGATCCTTATCGACTGCGTTTTTCCCAGTGGACCCTTTACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCTTTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGGTCGCATGCGCTAGGGATATTGTTGAAAGGTTTCGCTGAATTCTTATCTCCCTTTACGATATCGTTTATTTTGCTTAGTGTAGACACTTGTGCAAAGTCGTGGTCAATTATTCTTTTGTGAATAACTGCGTCTTGGATTTTGGAATCGATATCCCTGTAGCAATATTGCCACCGCCTCTTTT             ]
[+] EMBL CD116699             [                                                                                                                                                                                                                                                                                                                                                                                      AGATCGTTTTTCA  TTTTTTTTTGAGCGTCCATTTTTTTAGGCTTCTTGCGAGGCAGTAAAACCTCATCAACTTCTTCATTATTTTTTGTGACGTTTGACTCAGTATTTAATGAATGGAGGAACTTTTCCATATCTTTAAGAGGGTTCGGTGGCGACTTAACACCTCTTAGGCTGCTAACAAAGCGCTCTGTTTTAAGCTCTCGTTTTCGTTTTGCAGACTCGATAGTTTTTAGTCGTGAAATGAGGGATAAGTGGTCGTGCAAAGTAGGATTGTATGATTGTCCTGGACAAGGTAGGGAATGGTTTCCTGGATCCTTATCGACTGCGTTTTTCCCAGTGGACCCTTTACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCTTTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGGTCGCATGCGCTAGGGATATTGTTGAAAGGTTTCGCTGAATTCTTATCTCCCTTTACGATATCGTTTATTTTGCTTAGTGTAGACACTTGTGCAAAGTCGTGGTCAATTATTCTTTTGTGAATAACTGCGTCTTGGATTTTGGAATCGATATCCCTGTAGCAATATTGCCACCGCCTCTTT              ]
[-] EMBL CD190345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 anAACCTCATCAACTTCTTCATTATTTTTTGTGACGTTTGACTCAGTATNTAATGAATGGAGGAACTTTTCCATATCTTTAAGAGGGTTCGGTGGCGACTTAACACCTCTTAGGCTGCTAACANAGCGCTCTGTTTTAAGCTCTCGTTTTCGTTTTGCAGACTCGATAGTTTTTAGTCGTGAAATGAGGGATAAGTGGTCGTGCAAAGTAGGATTGTATGATTGTCCTGGACAAGGTAGGGAATGGTTTCCTGGATCCTTATCGACTGCGTTTTTCCCAGTGGACCCTTTACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCTTTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGGTCGCATGCGCTAGGGATATTGTTGAAAGGTTTCGCTGAATTCTTATCT                                                                                                                                                  ]
[+] EMBL CD190328             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTGTGACGTTTGACTCAGTATTTAATGAATGGAGGAACTTTTCCATATCTTTAAGAGGGTTCGGTGGCGACTTAACACCTCTTAGGCTGCTAACAAAGCGCTCTGTTTTAAGCTCTCGTTTTCGTTTTGCAGACTCGATAGTTTTTAGTCGTGAAATGAGGGATAAGTGGTCGTGCAAAGTAGGATTGTATGATTGTCCTGGACAAGGTAGGGAATGGTTTCCTGGATCCTTATCGACTGCGTTTTTCCCAGTGGACCCTTTACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCTTTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGGTCGCATGCGCTAGGGATGTTGTTGAAAGGTTTCGCTGAATTCTTATCTCCCTTTACGATATCGTTTATTTTGCTTAGTGTAGACACTTGTGCAAAGTCGTGGTCAATTATTCTTTTGTGAATAACTGCGTCTTGGATTTTGGAATCGATATCCCTGTAGCAATATTGCCACCGCCTCTTTTTGTTTTTTCCAgg]
[-] EMBL CD123277             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGACGTTTGACTCAGTATTTAATGAATGGAGGAACTTTTCCATATCTTTAAGAGGGTTCGGTGGCGACTTAACACCTCTTAGGCTGCTAACAAAGCGCTCAGTTTTAAGCTCTCGTTTTCGTTTTGCAGACTCGATAGTTTTTAGTCGTGAAATGAGGGATAAGTGGTCGTGCAAAGTAGGATTGTATGATTGTCCTGGACAAGGTAGGGAATGGTTTCCTGGATCCTTATCGACTGCGTTTTTCCCAGTGGACCCTTTACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCCTTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGGTCGCATGCGCTAGGGATATTGTTGAAAGGTTTCGCTGAATTCTTATCTCCCTTTACGATATCGTTTATTTTGCTTAGTGTTGACACTTGTGCAAAGTCGTGGTCAATTATTCTTTTGTGAATAACTGCGTCTTGGATTTTGGAA                                                  ]
[-] EMBL CD183510             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTCCTGGACAAGGTAGGGAATGGTTTCCTGGATCCTTATCGACTGCGTTTTTCCCAGTGGACCCTTTACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCTTTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGGTCGCATGCGCTAGGGATATTGTTGAAAGGTTTCGCTGAATTCTTATCTCCCTTTACGATATCGTTTATTTTGCTTAGTGTTGACACTTGTGCAAAGTCGTGGTCAATTATTCTTTTGTGAATAACTGCGTCTTGGATTTTGGAATCGATATCCCTGTAGCAATATTGCCACCGCCTCTTTTTGTTTTTTCCAA ]
[+] EMBL CD133401             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGAATGGTTTCCTGGATCCTTATCGACTGCGTTTTTCCCAGTGGACCCTTTACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCTTTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGGTCGCATGCGCTAGGGATATTGTTGAAAGGTTTCGCTGAATTCTTATCTCCCTTTACGATATCGTTTATTTTGCTTAGTGTTGACACTTGTGCAAAGTCGTGGTCAATTATTCTTTTGTGAATAACTGCGTCTTGGATTTTGGAATCGATATCCCTGTAGCAATATTGCCACCGCCTCTTTTTGTTTTTTCCAA ]
[-] EMBL CD202590             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTTCCTGGATCCTTATCGANTGCGTTTTTCCCAGTGGACCCTTTACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCTTTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGCTCGCATGCGCTAGGGATATTGTTGAAAGGTTTCGCTGAATTCTTATCTCCCTTTACGATATCGTTTATTTTGCTTAGTGNTGACACTTGTGCAAAGTCGTGGTCAATTATTCTTTTGTGAA                                                                         ]


>consensus_9637#0 TTTTTTTTTTTTTTTTTTTTTTTTTTCGCTGGATAGGATAATACTCACAGATATTTACAA GCAATCTAGATGATTACATTGGTATGTTTACTTAGCGCTTGCGTTCAAATGGTGTGCTTT TGCGTTTGCTACCCAACGTTTTTCGAGCACGTGGACATCTGTTTCGCCGACGTTCAACCT CATGAAATAAATGGCCTTCCGGACACAACTTTCTTAATGATGACGATATCTCATTTGGCA ATTGAAACGGGATATTCAAATTAACTTTTTTCAGTTTATCACGAGTCTCATTTTTAGCTT TGGCTGCTAACTTTCGCCTTTCCCTGGTTTTCTTTTCACGTTTGATTTCCTTAAGCAACT TAGGTAAATTTTCAAGATCGTTTTTCATTTTTTTTTGAGCGTCCATTTTTTTAGGCTTCT TGCGAGGCAGTAAAACCTCATCAACTTCTTCATTATTTTTTGTGACGTTTGACTCAGTAT TTAATGAATGGAGGAACTTTTCCATATCTTTAAGAGGGTTCGGTGGCGACTTAACACCTC TTAGGCTGCTAACAAAGCGCTCTGTTTTAAGCTCTCGTTTTCGTTTTGCAGACTCGATAG TTTTTAGTCGTGAAATGAGGGATAAGTGGTCGTGCAAAGTAGGATTGTATGATTGTCCTG GACAAGGTAGGGAATGGTTTCCTGGATCCTTATCGACTGCGTTTTTCCCAGTGGACCCTT TACCAGAAGACATCGAAGCTGGTACATCTTTCCAAATATCAATTTCAGCAAGTTTTCTCT TTTCCAATTTTGGCAGCGAGGTATGCAACCTTCGGTCGCATGCGCTAGGGATATTGTTGA AAGGTTTCGCTGAATTCTTATCTCCCTTTACGATATCGTTTATTTTGCTTAGTGTTGACA CTTGTGCAAAGTCGTGGTCAATTATTCTTTTGTGAATAACTGCGTCTTGGATTTTGGAAT CGATATCCCTGTAGCAATATTGCCACCGCCTCTTTTTGTTTTTTCCAAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)