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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9706 cluster # 9706       Sequences # 11       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9706#0 length = 1377 sequences # 11  

consensusID : consensus_9706#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1377
fasta sequence
                              [AAGTAAAATNAGGGAAGACAACGCTATTCCAAATCTGGTTCCATTCAATTCCCACAAATA-ATTACATTTGATTATTTGCCNCAACCAAATAGTATGGGCAAGGTAACAACAGTTGGCTAGATTTAGTAATGCAAAACTCTTGGTAATTAAGGAGGGGAGTGTTGAGAAAAACATTCCGCGAATAATTTTTACTTTATAGGAAACAAATATGAAA-ATTTACAAAAGGAGCAAGTAAATAGTAAGTCAAATCAATACAGACACAAGGACTCGTTGTCAACTAACGTTACTTGCGAATAAAACGACGATGTGTACTTAGAAAAGATTGGTGAAAAATGAATGAATGAGCAAATG-TTTATGCGTGGAAATGAGGTGCTGAAGATACTAGTTTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAAACCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTACATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACAGACACGAATGTCTTCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAACGAATGGGGTCGATATGAAGACATAGAAGTTGAAAAGGGCAAACTATTCAAGTACCATTAATTATGTACGTATATAACTACAGAATCACATACATACAATGTTTTTTTGACGACCATAATGAATATGTCCAATGACTTGTGTACAACAATAACTGGCTGGTAAAACAAAAGATAAATGAATATATATATATATATATATGGTCGGTTTATATGATTTATTTGATAACCGTTTGAGTCCATTTGAAAGGTTTAATACAAATAAGCTGTTGGTATTATATCCATTCACATATATATTAAATACTAATGATGAAGATGGAATGTACTGCATACATTTCAATATTCATTTCTGTATTTCACTTGGTGAATAATATTTATTATTAATTTAATAATTATGCTCGTGTATCCT]

[+] EMBL SMAA43811            [AAGTAAAATNAGGGAAGACAACGCTATTCCAAATCTGGTTCCATTCAATTCCCACAAATANATTACATTTGATTATTTGCCNCAACCAAATAGTATGGGCAAGGTAACAACAGTTGGCTAGATTTAGTAATGCAAAACTCTTGGTAATTAAGGAGGGGAGTGTTGAGAAAAACATTCCGCGAATAATTTTTGCTTTATAGGAAACAAATATGAAATGTGTACAAAAGGCGCAAATAAATAGTAAGTCAAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI976248             [AAGTAAAATTAGGGAAGACAACGCTATTCCAAATCTGGTTCCATTCAATTCCCACAAATA ATTACATTTAATTATTTTTTTCAACCAAATAGTATGGGCAAGGTAACAACAGTTGGCTAGATTTAGTAATGCAAAACTCTTGGTAATTAAGGAGGGGAGTGTTGAGAAAAACATTCCGCGAATAATTTTTACTTTATAGGAAACAAATATGAAA ATTTACAAAAGGAGCAAGTAAATAGTAAGTCAAATCAATACAGACACAAGGACTCGTTGTCAACTAACGTTACTTGCGAATAAAACGACGATGTGTACTTAGAAAAGATTGGTGAAAAATGAATGAATGAGCAAATG TTTATGCGTGGAAATGAGGTGCTGAAGATACTAGTTTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAAACCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AI977090             [                                                                                                                                                                                         ATTTTTACTTTATAGGAAACAAATATGAAA ATTTACAAAAGGAGCATGTAAATAGTAAGTCAAATCAATACTGACACAAGGACTCGTTGTCAACTAACGTTACTTGCGAATAAAACGACGATGTGTACTTAGAAAAGATTGGTGAAAAATGAATGAATGACCAAATG TTTATGCGTGGAAATGAGGTGCTGAAGATACTAGCTTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAAACCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTACATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL AI618824             [                                                                                                                                                                                                                                                                                                     aAATAAAACGACGATGTGTACTTAGAAAAGATTGGTGAAAAATGAATGAATGAGCAAATG TTTATGCGTGGAAATGAGGTGCTGAAGATACTAGTTTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAAACCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD092571             [                                                                                                                                                                                                                                                                                                                             GAAAAGATTGGTGAAAAATGAATGAATGAGC AATGTTTTATGCGTGNNAATGAGGTGCTGAAGATACTAG TTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATANAGCTACATCAAATAACCCAATGAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTACATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACAGACACGAATGTCTCCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AI067192             [                                                                                                                                                                                                                                                                                                                                                                                                                           TTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAACCCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTACATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACAGACACGAATGTCTTCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAACGAATG                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AI067711             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACAGACACGAATGTCCTCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAACGAATG                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AI067119             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAGACACG ATGTCTTCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAA                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD164603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   acaccagACGAATGTCTTCAAGACAATTAGAAATACACGAAACTACAAAGAAGAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGCTCGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACTACTCTGCGAAAACTGACTAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD164630             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATA                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD169245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAACGAATGGGGTCGATATGAAGACATAGAAGTTGAAAAGGGCAAACTATTCAAGTACCATTAATTATGTACGTATATAACTACAGAATCACATACATACAATGTTTTTTTGACGACCATAATGAATATGTCCAATGACTTGTGTACAACAATAACTGGCTGGTAAAACAAAAGATAAATGAATATATATATATATATATATGGTCGGTTTATATGATTTATTTGATAACCGTTTGAGTCCATTTGAAAGGTTTAATACAAATAAGCTGTTGGTATTATATCCATTCACATATATATTAAATACTAATGATGAAGATGGAATGTACTGCATACATTTCAATATTCATTTCTGTATTTCACTTGGTGAATAATATTTATTATTAATTTAATAATTATGCTCGTGTATCCT]


>consensus_9706#0 AAGTAAAATNAGGGAAGACAACGCTATTCCAAATCTGGTTCCATTCAATTCCCACAAATA ATTACATTTGATTATTTGCCNCAACCAAATAGTATGGGCAAGGTAACAACAGTTGGCTAG ATTTAGTAATGCAAAACTCTTGGTAATTAAGGAGGGGAGTGTTGAGAAAAACATTCCGCG AATAATTTTTACTTTATAGGAAACAAATATGAAAATTTACAAAAGGAGCAAGTAAATAGT AAGTCAAATCAATACAGACACAAGGACTCGTTGTCAACTAACGTTACTTGCGAATAAAAC GACGATGTGTACTTAGAAAAGATTGGTGAAAAATGAATGAATGAGCAAATGTTTATGCGT GGAAATGAGGTGCTGAAGATACTAGTTTTTTATAATCTTTCTTAGATATTTGTAAATATA GATGCAGATACACATAAAGCTACATCAAATAAACCAATAAATTGAATTGATAACGAAGTG TCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTACATTTAATACCAAAAAA CGAATAAAATAATTGAACATCGAACTAAGATTATAAAACAGACACGAATGTCTTCAAGAC AATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGA CAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATAT TAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGAT AACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACT ACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACA ACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAG GAAGCCACAAACGAATGGGGTCGATATGAAGACATAGAAGTTGAAAAGGGCAAACTATTC AAGTACCATTAATTATGTACGTATATAACTACAGAATCACATACATACAATGTTTTTTTG ACGACCATAATGAATATGTCCAATGACTTGTGTACAACAATAACTGGCTGGTAAAACAAA AGATAAATGAATATATATATATATATATATGGTCGGTTTATATGATTTATTTGATAACCG TTTGAGTCCATTTGAAAGGTTTAATACAAATAAGCTGTTGGTATTATATCCATTCACATA TATATTAAATACTAATGATGAAGATGGAATGTACTGCATACATTTCAATATTCATTTCTG TATTTCACTTGGTGAATAATATTTATTATTAATTTAATAATTATGCTCGTGTATCCT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)