These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9706#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1377 fasta sequence [AAGTAAAATNAGGGAAGACAACGCTATTCCAAATCTGGTTCCATTCAATTCCCACAAATA-ATTACATTTGATTATTTGCCNCAACCAAATAGTATGGGCAAGGTAACAACAGTTGGCTAGATTTAGTAATGCAAAACTCTTGGTAATTAAGGAGGGGAGTGTTGAGAAAAACATTCCGCGAATAATTTTTACTTTATAGGAAACAAATATGAAA-ATTTACAAAAGGAGCAAGTAAATAGTAAGTCAAATCAATACAGACACAAGGACTCGTTGTCAACTAACGTTACTTGCGAATAAAACGACGATGTGTACTTAGAAAAGATTGGTGAAAAATGAATGAATGAGCAAATG-TTTATGCGTGGAAATGAGGTGCTGAAGATACTAGTTTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAAACCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTACATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACAGACACGAATGTCTTCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAACGAATGGGGTCGATATGAAGACATAGAAGTTGAAAAGGGCAAACTATTCAAGTACCATTAATTATGTACGTATATAACTACAGAATCACATACATACAATGTTTTTTTGACGACCATAATGAATATGTCCAATGACTTGTGTACAACAATAACTGGCTGGTAAAACAAAAGATAAATGAATATATATATATATATATATGGTCGGTTTATATGATTTATTTGATAACCGTTTGAGTCCATTTGAAAGGTTTAATACAAATAAGCTGTTGGTATTATATCCATTCACATATATATTAAATACTAATGATGAAGATGGAATGTACTGCATACATTTCAATATTCATTTCTGTATTTCACTTGGTGAATAATATTTATTATTAATTTAATAATTATGCTCGTGTATCCT] [+] EMBL SMAA43811 [AAGTAAAATNAGGGAAGACAACGCTATTCCAAATCTGGTTCCATTCAATTCCCACAAATANATTACATTTGATTATTTGCCNCAACCAAATAGTATGGGCAAGGTAACAACAGTTGGCTAGATTTAGTAATGCAAAACTCTTGGTAATTAAGGAGGGGAGTGTTGAGAAAAACATTCCGCGAATAATTTTTGCTTTATAGGAAACAAATATGAAATGTGTACAAAAGGCGCAAATAAATAGTAAGTCAAATCA ] [+] EMBL AI976248 [AAGTAAAATTAGGGAAGACAACGCTATTCCAAATCTGGTTCCATTCAATTCCCACAAATA ATTACATTTAATTATTTTTTTCAACCAAATAGTATGGGCAAGGTAACAACAGTTGGCTAGATTTAGTAATGCAAAACTCTTGGTAATTAAGGAGGGGAGTGTTGAGAAAAACATTCCGCGAATAATTTTTACTTTATAGGAAACAAATATGAAA ATTTACAAAAGGAGCAAGTAAATAGTAAGTCAAATCAATACAGACACAAGGACTCGTTGTCAACTAACGTTACTTGCGAATAAAACGACGATGTGTACTTAGAAAAGATTGGTGAAAAATGAATGAATGAGCAAATG TTTATGCGTGGAAATGAGGTGCTGAAGATACTAGTTTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAAACCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTAC ] [+] EMBL AI977090 [ ATTTTTACTTTATAGGAAACAAATATGAAA ATTTACAAAAGGAGCATGTAAATAGTAAGTCAAATCAATACTGACACAAGGACTCGTTGTCAACTAACGTTACTTGCGAATAAAACGACGATGTGTACTTAGAAAAGATTGGTGAAAAATGAATGAATGACCAAATG TTTATGCGTGGAAATGAGGTGCTGAAGATACTAGCTTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAAACCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTACATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACA ] [-] EMBL AI618824 [ aAATAAAACGACGATGTGTACTTAGAAAAGATTGGTGAAAAATGAATGAATGAGCAAATG TTTATGCGTGGAAATGAGGTGCTGAAGATACTAGTTTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAAACCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAG ] [-] EMBL CD092571 [ GAAAAGATTGGTGAAAAATGAATGAATGAGC AATGTTTTATGCGTGNNAATGAGGTGCTGAAGATACTAG TTTTTATAATCTTTCTTAGATATTTGTAAATATAGATGCAGATACACATANAGCTACATCAAATAACCCAATGAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTACATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACAGACACGAATGTCTCCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACA ] [-] EMBL AI067192 [ TTTGTAAATATAGATGCAGATACACATAAAGCTACATCAAATAACCCAATAAATTGAATTGATAACGAAGTGTCAATGACAAACTTATGAGATGATCAAGTTACACCATTTGTTACATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACAGACACGAATGTCTTCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAACGAATG ] [-] EMBL AI067711 [ CATTTAATACCAAAAAACGAATAAAATAATTGAACATCGAACTAAGATTATAAAACAGACACGAATGTCCTCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAACGAATG ] [-] EMBL AI067119 [ CAGACACG ATGTCTTCAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAA ] [+] EMBL CD164603 [ acaccagACGAATGTCTTCAAGACAATTAGAAATACACGAAACTACAAAGAAGAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGCTCGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACTACTCTGCGAAAACTGACTAATC ] [+] EMBL CD164630 [ CAAGACAATTAGAAATACACGAAACTACAAAGAAAAAATCAACCGGTGACACGGTAAATATTTAGACAAGAAACAGAATAAAAGCAAAAAATAATATATATGAAATATGTGTAGTATTAATCATATTAATGAATGAAAATGAAGATCGAACGAAACAGAATGAAAAAGAGATGTATCTTCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATA ] [+] EMBL CD169245 [ TCGGAGATAACAATTTTAAATACACTAGTTTGATCGTCACTGTTACGATAATTATCATTGGTATTACTACTACTACTGCTACCAAGATTTACAGGAAGAAGACAAATGAATTGATGAAAAGAGATACAACTCTGCGAAAACTGACTAATCAGAATGAGCGAGAGAAGTATACCATAGAGAAATTTGAGGAAGCCACAAACGAATGGGGTCGATATGAAGACATAGAAGTTGAAAAGGGCAAACTATTCAAGTACCATTAATTATGTACGTATATAACTACAGAATCACATACATACAATGTTTTTTTGACGACCATAATGAATATGTCCAATGACTTGTGTACAACAATAACTGGCTGGTAAAACAAAAGATAAATGAATATATATATATATATATATGGTCGGTTTATATGATTTATTTGATAACCGTTTGAGTCCATTTGAAAGGTTTAATACAAATAAGCTGTTGGTATTATATCCATTCACATATATATTAAATACTAATGATGAAGATGGAATGTACTGCATACATTTCAATATTCATTTCTGTATTTCACTTGGTGAATAATATTTATTATTAATTTAATAATTATGCTCGTGTATCCT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||