These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9724#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 730 fasta sequence [GCGGTTGCGGGAATTCGATTCACACAGAACCCCGTCGCAACACTTTTGAAAAAGGCGGATAAAAACCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA-AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA-CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGACGGACCGCATTGCGACCCGGGTGTTTATCGAAT] [+] EMBL CD086331 [GCGGTTGCGGGAATTCGATTCACACAGAACCCCGTCGCAACACTTTTGAAAAAGGCGGGTAAAAACCAAGGCTATACCACCGCTCCACCAGCGCGGGGCTTTGGGCCAACAGCCCAAGCAGCAGGG CAACCACGAGTAAAAGGGTAACTTTGCGCAACATAAATGGGCGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAAATCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCCCGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAGGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGACCCGAC ACCCCGATGATGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAAGCATATTGATGTAAAAGACTGGATCTACGAGGTTGTGAACCTGAGCATACCGATGCAAAAGAACTGTGCTTACGAAGCCATGGA ] [-] EMBL CD086367 [ TTG AAAAGGCGGAT AAAACCAAGGCTGTACACCCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGCGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGAC ] [-] EMBL CD086315 [ AAAAAGGCGGATAAAAACCAAGGCTGTACCGCCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGACGGACCGCATTGCGACCCGGGTGTTTATCGAAT] [+] EMBL CD086320 [ AAAAAGGCGGATAAAAACCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAGAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATCGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTNTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCANAAGACCTGTGCTTACGAAGCCATGGACGGAC ] [+] EMBL CD086319 [ AAAAAGGCGGATAAAAGCCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAGTCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGTCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCACTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCNCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTNTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGta ] [+] EMBL CD086401 [ AAAAAGGCGGATAAAAACCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTGATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCCCGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGGAACGGTTAAAATGA CCGACAACCCCGATGAGGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCNCCGAAAGCCATATTGGTGTAAAAGACTGGATCTACCAGTGTGTGAACCTGAGCCTACCGATGCCAAAGACCTGTGCCTTCGAAGCCATTGA ] [+] EMBL CD086327 [ AAAAAGGCGGGTAAAAACCAAGGCTATACCACCGCTCCACCAGCGCGGGGCTTTGGGCCAACAGCCCAAGCAGCAGGG CAACCACGAGTAAAAGGGTAACTTTGCGCAACAGAAATGGGCGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAAATCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCCCGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAGGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCA ] [-] EMBL CD086310 [ AAAGGGCGGATAAAAACCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAGCCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCAAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTATGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGAC ] [-] EMBL CD086403 [ AAAGCGGGGTAAAACCAAGGCTATACCACCGCTCCACCAGCGCGGGGCTTTGGGCCAACAGCNCAAGCAGCAGGG CAACCACGAGTAAAAGGGTAACTNTGCGCAACAGAAATGGGCGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAAATCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCCCGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAGGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGATGAGGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGAC ] [-] EMBL CD086369 [ GCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGAC ] [-] EMBL CD086366 [ CGATGCAGCAGCAGCCTGCCCGTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGATGAGGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGACGGACCGCATTGCGACCCc ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||