cluster # 9786

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Schistosoma mansoni
cluster # 9786 cluster # 9786 Sequences # 11 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9786#0 length = 890 sequences # 4
consensus_9786#1 length = 691 sequences # 2
consensus_9786#2 length = 524 sequences # 1

consensus_9786#3 length = 471 sequences # 2
consensus_9786#4 length = 467 sequences # 1
consensus_9786#5 length = 451 sequences # 1

consensusID : consensus_9786#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 890
fasta sequence

                              [AAAATATCGACATCATGTGACACATTTGATACATTTTGAATAAGGTTCCTTATACATATTCGGATATATTAATCCCAATTGTCGTCCAAAACATTCATGTATTACTGGAATAACACTGGATTCCACAGAATTTTTACAATTATTCTCAGGCTGGTTTTCATCATGACCGGAATCTAAACGATCTGACGACTGCGCATTATCTAGTGATTTAGTTGACTTAGAAGTGTCAGTTGAGACAGGACTCAGTTGTCGATGATCCTTAAGAAAGCCCATACCACTAGTAGTTTTAATTTCAGCATCTTCATCAATACAGGGATTAACTGGAGATTTACATGGTGAACTCTCTTCACAATTGGATCCCTCCAGACACATATTTTGATGACGAATATACTTGGTCAACCTTTCGTATGAGGAAAATGAATGAGGGTATAATGAACAGCAAGAGATACTTTGAGATATTCATGTAAAAATGATCGAGAATGTTTCACGTGATTGGACGTTCAATATGATATACTAATTAGACATTGATGTGGCAAACGAATACAAAAATAAGCTGACCTGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATAACACCGCCAGTTGGTAGAATCAAAACCCCAATGGTTTAAATTATCGACTTCAGTGACGGTATGTGTATGTCCAACAAACTGCTCAGGAGAAAATATCGACAACATGTGACACATTTGATACATTTTGAATAAGGNTCCTTATACATATTCGGATATATTAA]

[+] EMBL CD187031             [AAAATATCGACATCATGTGACACATTTGATACATTTTGAATAAGGTTCCTTATACATATTCGGATATATTAATCCCAATTGTCGTCCAAAACATTCATGTATTACTGGAATAACACTGGATTCCACAGAATTTTTACAATTATTCTCAGGCTGGTTTTCATCATGACCGGAATCTAAACGATCTGACGACTGCGCATTATCTAGTGATTTAGTTGACTTAGAAGTGTCAGTTGAGACAGGACTCAGTTGTCGATGATCCTTAAGAAAGCCCATACCACTAGTAGTTTTAATTTCAGCATCTTCATCAACACAGGGATTAACTGGAGATTTACATGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD120857             [                                                                                                                                                                          AATCTAAACGATCTGACGACTGCGCATTATCTAGTGATTTAGTTGACTTAGAAGTGTCAGTTGAGACAGGACTCAGTTGTCGATGATCCTTAAGAAAGCCCATACCACTAGTAGTTTTAATTTCAGCATCTTCATCAATACAGGGATTAACTGGAGATTTACATGGTGAACTCTCTTCACAATTGGATCCCTCCAGACACATATTTTGATGACGAATATACTTGGTCAACCTTTCGTATGAGGAAAATGAATGAGGGTATAATGAACAGCAAGAGATACTTTGAGATATTCATGTAAAAATGATCGAGAATGTTTCACGTGATTGGACGTTCAATATGATATACTAATTAGACATTGATGTGGCAAACGAATACAAAAATAAGCTGACCTGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATAACACCG                                                                                                                                                           ]
[+] EMBL CD120842             [                                                                                                                                                                          AATCTAAACGATCTGACGACTGCGCATTATCTAGTGATTTAGTTGACTTAGAAGTGTCAGTTGAGACAGGACTCAGTTGTCGATGATCCTTAAGAAAGCCCATACCACTAGTAGTTTTAATTTCAGCATCTTCATCAATACAGGGATTAACTGGAGATTTACATGGTGAACTCTCTTCACAATTGGATCCCTCCAGACACATATTTTGATGACGAATATACTTGGTCAACCTTTCGTATGAGGAAAATGAATGAGGGTATAATGAACAGCAAGAGATACTTTGAGATATTCATGTAAAAATGATCGAGAATGTTTCACGTGATTGGACGTTCAATATGATATACTAATTAGACATTGATGTGGCAAACGAATACAAAAATAAGCTGACCTGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGTTTCTTTGGTATTAGATTTCCC                                                                                                                                                                                                                                                           ]
[+] EMBL CD165074             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATAACACCGCCAGTTGGTAGAATCAAAACCCCAATGGTTTAAATTATCGACTTCAGTGACGGTATGTGTATGTCCAACAAACTGCTCAGGAGAAAATATCGACAACATGTGACACATTTGATACATTTTGAATAAGGNTCCTTATACATATTCGGATATATTAA]




>consensus_9786#0
AAAATATCGACATCATGTGACACATTTGATACATTTTGAATAAGGTTCCTTATACATATT
CGGATATATTAATCCCAATTGTCGTCCAAAACATTCATGTATTACTGGAATAACACTGGA
TTCCACAGAATTTTTACAATTATTCTCAGGCTGGTTTTCATCATGACCGGAATCTAAACG
ATCTGACGACTGCGCATTATCTAGTGATTTAGTTGACTTAGAAGTGTCAGTTGAGACAGG
ACTCAGTTGTCGATGATCCTTAAGAAAGCCCATACCACTAGTAGTTTTAATTTCAGCATC
TTCATCAATACAGGGATTAACTGGAGATTTACATGGTGAACTCTCTTCACAATTGGATCC
CTCCAGACACATATTTTGATGACGAATATACTTGGTCAACCTTTCGTATGAGGAAAATGA
ATGAGGGTATAATGAACAGCAAGAGATACTTTGAGATATTCATGTAAAAATGATCGAGAA
TGTTTCACGTGATTGGACGTTCAATATGATATACTAATTAGACATTGATGTGGCAAACGA
ATACAAAAATAAGCTGACCTGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGC
GTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCAC
AGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAA
ACGAAGATAACACCGCCAGTTGGTAGAATCAAAACCCCAATGGTTTAAATTATCGACTTC
AGTGACGGTATGTGTATGTCCAACAAACTGCTCAGGAGAAAATATCGACAACATGTGACA
CATTTGATACATTTTGAATAAGGNTCCTTATACATATTCGGATATATTAA

consensusID : consensus_9786#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 691
fasta sequence

                              [AGAACTACCACTTGATATAATTAACATTAACGTTTTGAGATATAATGAAAATTTTAATAATTTCGAGGATCGAAAATGTTGCACGAAGTTAATGGTCAAAATGAACTTATTCTAAAATGATTAGGACCATATCAGGATACGGTACCCAGTAAGAATAATACAAGTGACTCAACGACTGTTATTGAGAAGGTAAAATCACTGTTGTCGCAAATATTCAGGCTAATTTCATTAATTTATGGAACAACGGATCAATACATTGATGAATAATGTACAACTAAATATATGAAAGTAACACAGACCCTAGTAAGTAGTGAGAGACGTGATGGGCGAAGCTAAATTATGAATGAATCCGAATGGATAAGGAAAGACGGGGGCGAAATGTAGAGATAAAATAAACATTAATTAGAAATCAACTCGAAAATTATAGCAAAATACGGTTCCAAATCGCCATAATCATTTATATTTTAAAGGCGGCATACATTAAAGGAAAACCCTAATGCCTAGANAATGGATTTGCAGAAAACANAGGAATTTGTTTTTAATGTANGCTGAAAAGAAACTTTCGTATGAGGAAAATGAATGAGGGTATAATGAACAGCNAGAGATACTTTGAGATATTCATGNTAAAATGATCGAGAATGTTTCACGTGATTGGNACGTTCATATGATATACTAATTAGACATTGATGGG]

[+] EMBL CD088529             [AGAACTACCACTTGATATAATTAACATTAACGTTTTGAGATATAATGAAAATTTTAATAATTTCGAGGATCGAAAATGTTGCACGAAGTTAATGGTCAAAATGAACTTATTCTAAAATGATTAGGACCATATCAGGATACGGTACCCAGTAAGAATAATACAAGTGACTCAACGACTGTTATTGAGAAGGTAAAATCACTGTTGTCGCAAATATTCAGGCTAATTTCATTAATTTATGGAACAACGGATCAATACATTGATGAATAATGTACAACTAAATATATGAAAGTAACACAGACCCTAGTAAGTAGTGAGAGACGTGATGGGCGAAGCTAAATTATGAATGAATCCGAATGGATAAGGAAAGACGGGGGCGAAATGTAGAGATAAAATAAACATTAATTAGAAATCAACTCGAAAATTATAGCAAAATACGGTTCCAAATCGCCATAATCATTTATATTTTAAAGGCGGCATACATTAAAGGAAAACCCTAATGCCTAGANAATGGATTTGCAGAAAACANAGGAATTTGTTTTTAATGTANGCTGAAAAGAAACTTTCGTATGAGGAAAATGAATGAGGGTATAATGAACAGCNAGAGATACTTTGAGATATTCATGNTAAAATGATCGAGAATGTTTCACGTGATTGGNACGTTCATATGATATACTAATTAGACATTGATGGG]
[+] EMBL CD088546             [AGAACTACCACTTGATATAATTAACATTAACGTTTTGAGATATAATGAAAATTTTAATAATTTCGAGGATCGAAAATGTTGCACGAGGTTAATGGTCAAAATGAACTTATTCTAAAATGATTAGGACCATATCAGGATACGGTACCCAGTAAGAATAATACAAGTGACTCAACGACTGTTATTGAGAAGGTAAAATCACTGTTGTCGCAAATATTCAGGCTAATTTCATTAATTTATGGAACAACGGATCAATACATTGATGAATAATGTACAACTAAATATATGAAAGTAACACAGACCCTAGTAAGTAGTGAGAGACGTGATGGGCGAAGCTAAATTATGAATGAATCCGAATGGATAAGGAAAGACGGGGGTGAAATGTAGAGATAAAATAAACATTAATTAGAAATCAACTCGAAAATTATAGCANAATACCGTTCCAAATCGCCATAATCATTTATATTTTANAGGCGGCATACATTAAAGGAAAACCCTAATGCCTAGAAAATGGATTTGCAGAAAACANAGGAATTTGTTTTTAATGTAGGCTGAAAAGAAACTTTCGTATGAGGAAn                                                                                                                    ]




>consensus_9786#1
AGAACTACCACTTGATATAATTAACATTAACGTTTTGAGATATAATGAAAATTTTAATAA
TTTCGAGGATCGAAAATGTTGCACGAAGTTAATGGTCAAAATGAACTTATTCTAAAATGA
TTAGGACCATATCAGGATACGGTACCCAGTAAGAATAATACAAGTGACTCAACGACTGTT
ATTGAGAAGGTAAAATCACTGTTGTCGCAAATATTCAGGCTAATTTCATTAATTTATGGA
ACAACGGATCAATACATTGATGAATAATGTACAACTAAATATATGAAAGTAACACAGACC
CTAGTAAGTAGTGAGAGACGTGATGGGCGAAGCTAAATTATGAATGAATCCGAATGGATA
AGGAAAGACGGGGGCGAAATGTAGAGATAAAATAAACATTAATTAGAAATCAACTCGAAA
ATTATAGCAAAATACGGTTCCAAATCGCCATAATCATTTATATTTTAAAGGCGGCATACA
TTAAAGGAAAACCCTAATGCCTAGANAATGGATTTGCAGAAAACANAGGAATTTGTTTTT
AATGTANGCTGAAAAGAAACTTTCGTATGAGGAAAATGAATGAGGGTATAATGAACAGCN
AGAGATACTTTGAGATATTCATGNTAAAATGATCGAGAATGTTTCACGTGATTGGNACGT
TCATATGATATACTAATTAGACATTGATGGG

consensusID : consensus_9786#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 524
fasta sequence

                              [CGGATATATTAATCCCAATTGTCGTCCAAAACATTCATGTATTACTGGAATAACACTGGATTCCACAGAATTTTTACAATTATTCTCAGGCTGGTTTTCATCATGACCGGAATCTAAACGATCTGACGACTGCGCATTATCTAGTGATTTAGTTGACTCAAAAGTGTCAGTTGAGACAGGACTCAGTTGTCGATGATCCTTAAGAAAGCCCATACCACTAGTAGTTTTAATTTCAGCATCTTCATCAATACAGGGATTAACTGGAGATTTACATGGTGAACTCTCTTCACAATTGGATCCCTCCAGACACATATTTTGATGACGAATATACTTGGTCAACCTTTCTGCATCGCTTTTACGAATTAGACCACAGCTACCGACAGTACGAGGAAGTATTTGGCGTGAATGTAACAGACTTAATTGAGCTGGGGTACACGTTGTGCATGCTATTTGAAGCTTTGTACATGCCTTATCTATGATCTGTAAATCCACATCGTGTAGCACAAAACGAAATAAATGTGGTA]

[+] EMBL CD062142             [CGGATATATTAATCCCAATTGTCGTCCAAAACATTCATGTATTACTGGAATAACACTGGATTCCACAGAATTTTTACAATTATTCTCAGGCTGGTTTTCATCATGACCGGAATCTAAACGATCTGACGACTGCGCATTATCTAGTGATTTAGTTGACTCAAAAGTGTCAGTTGAGACAGGACTCAGTTGTCGATGATCCTTAAGAAAGCCCATACCACTAGTAGTTTTAATTTCAGCATCTTCATCAATACAGGGATTAACTGGAGATTTACATGGTGAACTCTCTTCACAATTGGATCCCTCCAGACACATATTTTGATGACGAATATACTTGGTCAACCTTTCTGCATCGCTTTTACGAATTAGACCACAGCTACCGACAGTACGAGGAAGTATTTGGCGTGAATGTAACAGACTTAATTGAGCTGGGGTACACGTTGTGCATGCTATTTGAAGCTTTGTACATGCCTTATCTATGATCTGTAAATCCACATCGTGTAGCACAAAACGAAATAAATGTGGTA]




>consensus_9786#2
CGGATATATTAATCCCAATTGTCGTCCAAAACATTCATGTATTACTGGAATAACACTGGA
TTCCACAGAATTTTTACAATTATTCTCAGGCTGGTTTTCATCATGACCGGAATCTAAACG
ATCTGACGACTGCGCATTATCTAGTGATTTAGTTGACTCAAAAGTGTCAGTTGAGACAGG
ACTCAGTTGTCGATGATCCTTAAGAAAGCCCATACCACTAGTAGTTTTAATTTCAGCATC
TTCATCAATACAGGGATTAACTGGAGATTTACATGGTGAACTCTCTTCACAATTGGATCC
CTCCAGACACATATTTTGATGACGAATATACTTGGTCAACCTTTCTGCATCGCTTTTACG
AATTAGACCACAGCTACCGACAGTACGAGGAAGTATTTGGCGTGAATGTAACAGACTTAA
TTGAGCTGGGGTACACGTTGTGCATGCTATTTGAAGCTTTGTACATGCCTTATCTATGAT
CTGTAAATCCACATCGTGTAGCACAAAACGAAATAAATGTGGTA

consensusID : consensus_9786#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 471
fasta sequence

                              [AGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATGGAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGTACCAGCAGGAAATGGAGCCACAGATGCACATAATCCTACACTTCGTAAAGCTGCACCTAGGGGTGGGGGTAGTTTAATAGGCTGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATAACACCGCCAGTTGGTAGAATCAAAACCCCAATGGTTTAAATTATCGACTTCAGTGACGGTATGTGTATGTCCAACAAACTGCTCAGGAGAAAAATATCCGAC-ACATGTGACACATTTGATACATTTTGA]

[+] EMBL CD184905             [AGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATGGAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGTACCAGCAGGAAATGGAGCCACAGATGCACATAATCCTACACTTCGTAAAGCTGCACCTAGGGGTGGGGGTAGTTTAATAGGCTGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATAACACCGCCAGTTGGTAGAATCAAAACCCCAATGGTTTAAATTATCGACTTCAGTGACGGTATGTGTATGTCCAACAAACTGCTCAGGAGAAAAATATCCGAC ACATGTGACACATTTGATACATTTTGA]
[+] EMBL CD184687             [AGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATGGAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGTACCAGCAGGAAATGGAGCCACAGATGCACATAATCCTACACTTCGTAAAGCTGCACCTAGGGATGGGGGTAGTTTAATAGGCTGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATNACACCGCCAGTTGGTAGAATCAAAACCCCAATGGTTTAAATTATCGACTTCAGTGACGGTATGTGTATGTCCAACAAACTGCTCAGGAGAAAAATAT CGACAACATGTGACACATTTGATACAT     ]




>consensus_9786#3
AGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATGGAAGCTTC
AGAAGTTTGAGAACGCTGTGAGTTAGTTGTACCAGCAGGAAATGGAGCCACAGATGCACA
TAATCCTACACTTCGTAAAGCTGCACCTAGGGGTGGGGGTAGTTTAATAGGCTGTGCAAA
CTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGT
ATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACT
AACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATAACACCGCCAGTTGGTAGA
ATCAAAACCCCAATGGTTTAAATTATCGACTTCAGTGACGGTATGTGTATGTCCAACAAA
CTGCTCAGGAGAAAAATATCCGACACATGTGACACATTTGATACATTTTGA

consensusID : consensus_9786#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 467
fasta sequence

                              [TTTGGGGCTGAATTACTTGAAGTACTGATTATTGTCGGGTCAAGTGCTTTATTTGGCCGTATAGGGAGGAACTGATGAGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATGGAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGNACCAGCAGGAAATGGAGCCACAGATGCACATAATCCTACACTTCGTAAAGCTGCACCTAGGGATGGGGGTAGTTTAATAGGCTGGGGGGACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATAACACCGCCAGTTGGTANAATCAAAACCCCAATNGTTCCTTCCATCGTC]

[-] EMBL CD178335             [TTTGGGGCTGAATTACTTGAAGTACTGATTATTGTCGGGTCAAGTGCTTTATTTGGCCGTATAGGGAGGAACTGATGAGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATGGAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGNACCAGCAGGAAATGGAGCCACAGATGCACATAATCCTACACTTCGTAAAGCTGCACCTAGGGATGGGGGTAGTTTAATAGGCTGGGGGGACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATAACACCGCCAGTTGGTANAATCAAAACCCCAATNGTTCCTTCCATCGTC]




>consensus_9786#4
TTTGGGGCTGAATTACTTGAAGTACTGATTATTGTCGGGTCAAGTGCTTTATTTGGCCGT
ATAGGGAGGAACTGATGAGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGT
TCACATATGGAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGNACCAGCAGGAAAT
GGAGCCACAGATGCACATAATCCTACACTTCGTAAAGCTGCACCTAGGGATGGGGGTAGT
TTAATAGGCTGGGGGGACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCA
ACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATA
TTGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAGATAA
CACCGCCAGTTGGTANAATCAAAACCCCAATNGTTCCTTCCATCGTC

consensusID : consensus_9786#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 451
fasta sequence

                              [TAATTCGACCATCGTTTGGTGCCCATAGACGACGCAGTGTTAGCTGGGTAGTATCATATTGGAAGGGGAAGATTGATTTGGGGCTGAATTACTTGAAGTACTGATTATTGTCTGGTCAAGTGCTTTATTTGGCCGTATAGGGAGGAACTGATGAGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATGGAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGTACCAGCAGGAAATGGAGCCACAGATGCACATAATCCTACACTTCGTAAAGCTGCACCTGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGAC]

[+] EMBL CD184745             [TAATTCGACCATCGTTTGGTGCCCATAGACGACGCAGTGTTAGCTGGGTAGTATCATATTGGAAGGGGAAGATTGATTTGGGGCTGAATTACTTGAAGTACTGATTATTGTCTGGTCAAGTGCTTTATTTGGCCGTATAGGGAGGAACTGATGAGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATGGAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGTACCAGCAGGAAATGGAGCCACAGATGCACATAATCCTACACTTCGTAAAGCTGCACCTGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCGACGAC]




>consensus_9786#5
TAATTCGACCATCGTTTGGTGCCCATAGACGACGCAGTGTTAGCTGGGTAGTATCATATT
GGAAGGGGAAGATTGATTTGGGGCTGAATTACTTGAAGTACTGATTATTGTCTGGTCAAG
TGCTTTATTTGGCCGTATAGGGAGGAACTGATGAGTTTTCGACTGACTAGTTTTTCGTAT
CAGGGCTGAAATTTGTTCACATATGGAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGT
TGTACCAGCAGGAAATGGAGCCACAGATGCACATAATCCTACACTTCGTAAAGCTGCACC
TGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACGGGT
TCTTTGGTATTAGATTTCCCAACAGCTTCATGACCACGCACAGTATTAATATTGGAAAGA
ATAGAACTAACATTCACATTTAACCGACGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9786#0      AAAATATCGACATCATGTGACACATTTGATACATTTTGAATAAGGTTCCTTATACATATT 60
consensus_9786#2      ------------------------------------------------------------
consensus_9786#4      ------------------------------------------------------------
consensus_9786#5      --------------------------------TAATTCGACCATCGTTTGGTGCCCATAG 28
consensus_9786#3      ------------------------------------------------------------
consensus_9786#1      ------------------------------------------------------------
                                                                                  

consensus_9786#0      CGGATATATTAATCCCAATTGTCGTCCAAAACATTCATGTATTACTGGAATAACACTGGA 120
consensus_9786#2      CGGATATATTAATCCCAATTGTCGTCCAAAACATTCATGTATTACTGGAATAACACTGGA 60
consensus_9786#4      ------------------------------------------------TTTGGGGCTGAA 12
consensus_9786#5      ACGACGCAGTGTTAGCTGGGTAGTATCATATTGGAAGGGGAAGATTGATTTGGGGCTGAA 88
consensus_9786#3      ------------------------------------------------------------
consensus_9786#1      ------------------------------------------------------------
                                                                                  

consensus_9786#0      TTCCACAGAATTTTTACAATTATTCTCAGGCTGGTTTTCATCATGACCGGAATCTAAACG 180
consensus_9786#2      TTCCACAGAATTTTTACAATTATTCTCAGGCTGGTTTTCATCATGACCGGAATCTAAACG 120
consensus_9786#4      TTACTTGAAGTACT---GATTATTGTCGGGTCAAGTGCTTTATTTGGCCGTATAGGGAGG 69
consensus_9786#5      TTACTTGAAGTACT---GATTATTGTCTGGTCAAGTGCTTTATTTGGCCGTATAGGGAGG 145
consensus_9786#3      ------------------------------------------------------------
consensus_9786#1      ------------------------------------------------------------
                                                                                  

consensus_9786#0      ATCTGACGACTGCGC-ATTATCTAGTGATTTAGTT---GACTTAGAAGTGTCAGTTGAGA 236
consensus_9786#2      ATCTGACGACTGCGC-ATTATCTAGTGATTTAGTT---GACTCAAAAGTGTCAGTTGAGA 176
consensus_9786#4      AACTGATGAGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATG 129
consensus_9786#5      AACTGATGAGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATG 205
consensus_9786#3      --------AGTTTTCGACTGACTAGTTTTTCGTATCAGGGCTGAAATTTGTTCACATATG 52
consensus_9786#1      -----------------AGAACTACCACTTGATAT----AATTAACATTAACGTTTTGAG 39
                                           ***    **    *      * *    *           

consensus_9786#0      CAGGACTCAGTTGTCGATGATCCTTAAGAAA-GCCCATACCACTAGTAGTTTTAATTTCA 295
consensus_9786#2      CAGGACTCAGTTGTCGATGATCCTTAAGAAA-GCCCATACCACTAGTAGTTTTAATTTCA 235
consensus_9786#4      GAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGNACCAGCAGGAAATGGAGCCACA 189
consensus_9786#5      GAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGTACCAGCAGGAAATGGAGCCACA 265
consensus_9786#3      GAAGCTTCAGAAGTTTGAGAACGCTGTGAGTTAGTTGTACCAGCAGGAAATGGAGCCACA 112
consensus_9786#1      ATATAATGAAAATTTTAATAATTTCGAGGATCGAAAATGTTGCACGAAGTTAATGGTCAA 99
                            * *    *     *       *                 * *  *        *

consensus_9786#0      ---GCATCTTCATCAATACAGGGATTAACTGGAGATTTACATGGTGAACTCTCTTCACAA 352
consensus_9786#2      ---GCATCTTCATCAATACAGGGATTAACTGGAGATTTACATGGTGAACTCTCTTCACAA 292
consensus_9786#4      GATGCACATAATCCTACACTTCGTAAAGCTGCACCTAGGGATGGGGGTAGTTTAATAGGC 249
consensus_9786#5      GATGCACATAATCCTACACTTCGTAAAGCTGCACCTGTGCA------------------- 306
consensus_9786#3      GATGCACATAATCCTACACTTCGTAAAGCTGCACCTAGGGGTGGGGGTAGTTTAATAGGC 172
consensus_9786#1      AATGAAC-TTATTCTAAAATGATTAGGACCATATCAGGATACGGTACCCAGTAAGAATAA 158
                         * *  *    * * *          *   *                           

consensus_9786#0      TTGGATCCCTCCAGACACATATTTTGATGACGAATATACTTGGTCAACCTTTC-GTATGA 411
consensus_9786#2      TTGGATCCCTCCAGACACATATTTTGATGACGAATATACTTGGTCAACCTTTCTGCATCG 352
consensus_9786#4      TGGGGGGACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACG-GG 308
consensus_9786#5      ------AACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACG-GG 359
consensus_9786#3      TGTGCAAACTTAATTTTGAATTCTTCCAGTCGACGATGAGCGTCCACGGCAACCACG-GG 231
consensus_9786#1      TACAAGTGACTCAACGACTGTTATTGAGAAGGTAAAATCACTGTTGTCGCAAATATTCAG 218
                                  *        * **      *   *                        

consensus_9786#0      GGAAAATGAATGAGGGTATAATGAACAGCAAGA-GATACTTTGAGATATTCA-TGTAAAA 469
consensus_9786#2      CTTTTACGAATTAGACCACAGCTACCGACA-----GTACGAGGAAGTATTTGGCGTGAAT 407
consensus_9786#4      TTCTTTGGTATTAGATTTC-----CCAACA----GCTTCATGACCACGCACAGTATTAAT 359
consensus_9786#5      TTCTTTGGTATTAGATTTC-----CCAACA----GCTTCATGACCACGCACAGTATTAAT 410
consensus_9786#3      TTCTTTGGTATTAGATTTC-----CCAACA----GCTTCATGACCACGCACAGTATTAAT 282
consensus_9786#1      GCTAATTTCATTAATTTATG--GAACAACGGATCAATACATTGATGAATAATGTACAACT 276
                               ** *            *  *       * *                  *  

consensus_9786#0      ATGATCGAGAATGTTTCACGTGATTGGACGTTCAATATGATATACTAA---TTAGACATT 526
consensus_9786#2      GTAACAGACTTAATTGAGCTGGGGTACACGTTGTGCATGCTATTTGAAGCTTTGTACAT- 466
consensus_9786#4      AT--TGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAG- 416
consensus_9786#5      AT--TGGAAAGAATAGAACTAACATTCACATTTAACCGACGAC----------------- 451
consensus_9786#3      AT--TGGAAAGAATAGAACTAACATTCACATTTAACCGACGACCCGTGTACAAACGAAG- 339
consensus_9786#1      AAATATATGAAAGTAACACAGACCCTAGTAAGTAGTGAGAGACGTGATGGGCGAAGCTAA 336
                                   *    *                      *                  

consensus_9786#0      GATGTGG-CAAACGAATACAAAAATAAGCTGACCTGTGCAAACTTAATTTTGAATTCTTC 585
consensus_9786#2      GCCTTAT-CTATGATCTGTAAATCCACATCGTGTAGCACAAAACGAAATAAATGTGGTA- 524
consensus_9786#4      ATAACAC-CGCCAGTTGGTANAATCAAAACCCCAATNGTTCCTTCCATCGTC-------- 467
consensus_9786#5      ------------------------------------------------------------
consensus_9786#3      ATAACAC-CGCCAGTTGGTAGAATCAAAACCCCAATGGTTTAAATTATCGACTTCAGTGA 398
consensus_9786#1      ATTATGAATGAATCCGAATGGATAAGGAAAGACGGGGGCGAAATGTAGAGATAAAATAAA 396
                                                                                  

consensus_9786#0      CAGTCGACGATGAGCGTCCACGGCAACCACGGGTTCTTTGGTATTAGATTTCCCAACAGC 645
consensus_9786#2      ------------------------------------------------------------
consensus_9786#4      ------------------------------------------------------------
consensus_9786#5      ------------------------------------------------------------
consensus_9786#3      CGGTATGTGTATGTCCAACAAACTGCTCAGGAGAAAAATATCCGACACATGTGACACATT 458
consensus_9786#1      CATTAATTAGAAATCAACTCGAAAATTATAGCAAAATACGGTTCCAAATCGCCATA-ATC 455
                                                                                  

consensus_9786#0      TTCATGACCACGCACAGTATTAATATTGGAAAGAATAGAACTAACATTCACATTTAACCG 705
consensus_9786#2      ------------------------------------------------------------
consensus_9786#4      ------------------------------------------------------------
consensus_9786#5      ------------------------------------------------------------
consensus_9786#3      TGATACATTTTGA----------------------------------------------- 471
consensus_9786#1      ATTTATATTTTAAAGGCGGCATACATT----AAAGGAAAACCCTAATGCCTAGANAATGG 511
                                                                                  

consensus_9786#0      ACGACCCGTGTACAAACGAAGATAACACCGCCAGTTGGTAGAATCAAAACCCCA-ATGGT 764
consensus_9786#2      ------------------------------------------------------------
consensus_9786#4      ------------------------------------------------------------
consensus_9786#5      ------------------------------------------------------------
consensus_9786#3      ------------------------------------------------------------
consensus_9786#1      ATTTGCAGAAAACANAGGAATTTGTTTTTAATGTANGCTGAAAAGAAACTTTCGTATGAG 571
                                                                                  

consensus_9786#0      TTAAATTATCGACTTCAGTGACGGTATGTGTATGTCCAACAAACTGCTCAGGAGAAAAT- 823
consensus_9786#2      ------------------------------------------------------------
consensus_9786#4      ------------------------------------------------------------
consensus_9786#5      ------------------------------------------------------------
consensus_9786#3      ------------------------------------------------------------
consensus_9786#1      GAAAATGAATGAGGGTATAATGAACAGCNAGAGATACTTTGAGATATTCATGNTAAAATG 631
                                                                                  

consensus_9786#0      ATCGACAACATGTGACACATTTGATACATTTTGAATA-AGGNTCCTTATACATATTCGGA 882
consensus_9786#2      ------------------------------------------------------------
consensus_9786#4      ------------------------------------------------------------
consensus_9786#5      ------------------------------------------------------------
consensus_9786#3      ------------------------------------------------------------
consensus_9786#1      ATCGAGAATGTTTCACGTGATTGGNACGTTCATATGATATACTAATTAGACATTGATGGG 691
                                                                                  

consensus_9786#0      TATATTAA 890
consensus_9786#2      --------
consensus_9786#4      --------
consensus_9786#5      --------
consensus_9786#3      --------
consensus_9786#1      --------