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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9842 cluster # 9842       Sequences # 11       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9842#0 length = 419 sequences # 11  

consensusID : consensus_9842#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 419
fasta sequence
                              [CTCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT-AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA-CTTCAAGATAATTCTTGTCATGGAAATATC-TCGCTTTTTTAAACCAATCGAATTTAAATCAGGGATTTACTATTTTTAATAGCTGG]

[+] EMBL CD157454             [CTCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA CTTCAAGATAATTCTTGTCATGGAAATATC TCGCTTTTTTAAACCAATCGAATTTTAATCAGGGATTTACTATTTTTAATAGCTG ]
[+] EMBL CD157435             [CTCACTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA CTTCAAGATAATTCTTGTCATGGAAATATCNTCGC TTTTTAAACCAATCGAANTTTAATCAGGGATTTACTATTTTTAATAGCTG ]
[+] EMBL CD119914             [CTCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATCGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTTAAATTTG AATTGGCATTAGACTTTT                                                                                                  ]
[+] EMBL CD157442             [CTCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATGTCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAACCTTC AGATNAT                                                                           ]
[-] EMBL CD157436             [ TCAATTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA CTTCAAGATAATTCTTGTCATGGAAATATC TCGCTTTTTTAAACCAATCGAATTTAAATCAGGGATTTACTATTTTTAATAGCTGG]
[-] EMBL CD157395             [ TCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGA                                                                                                                    ]
[-] EMBL CD157397             [ TCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGA                                                                                                                    ]
[-] EMBL CD157450             [ TCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGA                                                                                                                    ]
[-] EMBL CD157401             [ TCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGA                                                                                                                    ]
[-] EMBL CD119517             [                                                                                                                         CATATACACGNCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA CTTCAAGATAATTCTTGTCATGGAAATATC TCGCTTTTTTAAACCAATCGAATTTAAATCAGGGATTTACTATTTTTAATAGCTGG]
[-] EMBL CD119503             [                                                                                                                                                                                                                                                                                                                            AGTCTTTTAGTACAGAAA CTTCAAGATAAGTCTTGTCATGGAAATATC TCGCGTTTTTAAGCCAATCGAATTTAAATCAGGGATTTACTATTTTTAATAGCTGG]


>consensus_9842#0 CTCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGT AATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGG CCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCA GTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGAT CAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTTAA TTTGAAATTGGCATTAGACTTTTAGTACAGAAACTTCAAGATAATTCTTGTCATGGAAAT ATCTCGCTTTTTTAAACCAATCGAATTTAAATCAGGGATTTACTATTTTTAATAGCTGG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)