These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9842#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 419 fasta sequence [CTCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT-AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA-CTTCAAGATAATTCTTGTCATGGAAATATC-TCGCTTTTTTAAACCAATCGAATTTAAATCAGGGATTTACTATTTTTAATAGCTGG] [+] EMBL CD157454 [CTCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA CTTCAAGATAATTCTTGTCATGGAAATATC TCGCTTTTTTAAACCAATCGAATTTTAATCAGGGATTTACTATTTTTAATAGCTG ] [+] EMBL CD157435 [CTCACTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA CTTCAAGATAATTCTTGTCATGGAAATATCNTCGC TTTTTAAACCAATCGAANTTTAATCAGGGATTTACTATTTTTAATAGCTG ] [+] EMBL CD119914 [CTCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATCGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTTAAATTTG AATTGGCATTAGACTTTT ] [+] EMBL CD157442 [CTCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATGTCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAACCTTC AGATNAT ] [-] EMBL CD157436 [ TCAATTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA CTTCAAGATAATTCTTGTCATGGAAATATC TCGCTTTTTTAAACCAATCGAATTTAAATCAGGGATTTACTATTTTTAATAGCTGG] [-] EMBL CD157395 [ TCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGA ] [-] EMBL CD157397 [ TCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGA ] [-] EMBL CD157450 [ TCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGA ] [-] EMBL CD157401 [ TCATTTTGATCAGAGGAGAAATTGACAAGGTGACCAAAGGAGAATGGGATATCGAATGTAATCCATTGAAAATGGCTCCACATACTATGGAAACAGTAATGGATTCGAAATGGGACAGGCCATATACACGCCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGA ] [-] EMBL CD119517 [ CATATACACGNCAAGTGGCAGCATTTCCAGCGCCATGGCAAAATATGAAAGATGAGTCAGTAAGTAAACGTTCGAAATTGTGGCCAACTGTGAGTCGGCTGGATGATGTATACGGTGATCAACACTTGATATGCACGTGCTCTTCACTTCTGGAAAATGAAACCAACTCCAAACTTT AATTTGAAATTGGCATTAGACTTTTAGTACAGAAA CTTCAAGATAATTCTTGTCATGGAAATATC TCGCTTTTTTAAACCAATCGAATTTAAATCAGGGATTTACTATTTTTAATAGCTGG] [-] EMBL CD119503 [ AGTCTTTTAGTACAGAAA CTTCAAGATAAGTCTTGTCATGGAAATATC TCGCGTTTTTAAGCCAATCGAATTTAAATCAGGGATTTACTATTTTTAATAGCTGG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||