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Schistosoma mansoni
cluster # 9886 cluster # 9886       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9886#0 length = 1284 sequences # 9  
consensus_9886#1 length = 892 sequences # 3  

consensusID : consensus_9886#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1284
fasta sequence
                              [NNTGAAGGCAGAAGATGTTGCCAATGTTTGAACCCGTCCAAAAAACTATTACCTGCAAAATTCTTAGCTATGCTGGAAGCAGAATTACTTCGACATTTCCGCTTACCCGATAATTCGAAGTTAAATGTTTTTAGATGCAAACAACAAGATAGCTCATTGATTGAACATACTGTAATTCACATGCCTGGAATCACATTGTTATAAACGATCAGAGTCCACCCATTTCGTCAACTCCCGATACATTATTTTCAACATTGCATCCTTCACATAGTTCATCAGATTCGTCTCATACAGACGATGAAGACAAGGAATTTCCACCTAAACGTGCTTTACGATTGGCTATTAGACGGTTATTGCAGCGTGTCAATCAATCACTTTTGATGTCAGAGAAGATGTGTCAATGTCATGCACTAAATCTTTGTTCACATAAGTCTGAAATTTGCGAGAAAGATAAGTTACCAATTCAACCTACTTCATCGGTGGATAATATAATTTGTCAAACTCCAAATACTTCAACACCATTCCATTCATATCCTTCTACTTTTTCTTCATCTTCCGCTCAAATTACGAAACATTATCAAACATCTTCATTGATTTGTTGTGATACATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAAATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTAATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCAAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATTTTTCATGACTTCCGGCTATCTG-TTTTTTTACACATGTACCTATTTAGAGTAATATTTTACTTTCAAATCCTTTTATACATCGCTCTTTCATTGTTGATCAAACCTTTTTGTATGCTAACTATTTACTTGTTTATTTTTACTTTACTGTTAGCTTTTATAC-AAAATAATATTTGC-TTGTTCAGAAAAAAAAGTTAAAAAA]

[+] EMBL CD080392             [NNTGAAGGCAGAAGATGTTGCCAATGTTTGAACCCGTCCAAAAAACTATTACCTGCAAAATTCTTAGCTATGCTGGAAGCAGAATTACTTCGACATTTCCGCTTACCCGATAATTCGAAGTTAAATGTTTTTAGATGCAAACAACAAGATAGCTCATTGATTGAACATACTGTAATTCACATGCCTGGAATCACATTGTTATAAACGATCAGAGTCCACCCATTTCGTCAACTCCCGATACATTATTTTCAACATTGCATCCTTCACATAGTTCATCAGATTCGTCTCATACAGACGATGAAGACAAGGAATTTCCACCTAAACGTGCTTTACGATTGGCTATTAGACGGTTATTGCAGCGTGTCAATCAATCACTTTTGATGTCAGAGAAGATGTGTCAATGTCATGCACTAAATCTTTGTTCACATAAGTCTGAAATTTGCGAGAAAGATAAGTTACCAATTCAACCTACTTCATCGGTGGATAATATAATTTGTCAAACTCCAAATACTTCAACACCATTCCATTCATATCCTTCTACTTTTTCTTCATCTTCCGCTCAAATTACGAAACATTATCAAACATCTTCATTGATTTGTTGTGATACATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTNTAAATTCTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD080677             [                                                                                                                                                                                                                                                                                                                                                                     AGCGTGTCAATCAATCACTTTTGATGTCAGAGAAGATGTGTCAATGTCATGCACTAAATCTTTGTTCACATAAGTCTGAAATTTGCGAGAAAGATAAGTTACCAATTCAACCTACTTCATCGGTGGATAATATAATTTGTCAAACTCCAAATACTTCAACACCATTCCATTCATATCCTTCTACTTTTTCTTCATCTTCCGCTCAAATTACGAAACATTATCAAACATCTTCATTGATTTGTTGTGATACATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAAATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTAATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCNAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCG AACTCTGACATATTTTTCATGACTTNCGGCTATCTG TTTTTTTACACATGTACCTATTTAGAGTAATATTTTACTTTCAAATCC TTTATACATCGCTCTTTCATTGGTGATCAAACC TTNTGNATGCTAACTATTTACTGG  TAATTTTAC TTACTGGNAGC  TTA AC AAA  AATATTTGC TTGT                     ]
[-] EMBL CD074486             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAAATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTAATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCAAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATTTTTCATGACTTCCGGCTATCTG TTTTTTTACACATGTACCTATTTAGAGTAATATTTTACTTTCAAATCCTTTTATACATCGCTCTTTCATTGTTGATCAAACCTTTTTGTATGCTAACTATTTACTTGTTTATTTTTACTTTACTGTTAGCTTTTATAC AAAATAATATTT                            ]
[-] EMBL CD074308             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAAATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTAATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCAAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATTTTTCATGACTTCCGGCTATCTG TTTTTTTACACATGTACCTATTTAGAGTAATATTTTACTTTCAAATCCTTTTATACATCGCTCTTTCATTGTTGATCAAACCTTTTTGTATGCTAACTATTTACTTGTTTATTTTTACTTTACTGTTAGCTTTTATAC AAAATAATATTT                            ]
[-] EMBL CD073938             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAAATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTAATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCAAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATTTTTCATGACTTCCGGCTATCTG TTTTTTTACACATGTACCTATTTAGAGTAATATTTTACTTTCAAATCCTTTTATACATCGCTCTTTCATTGTTGATCAAACCTTTTTGTATGCTAACTATTTACTTGTTTATTTTTACGTTACTGTTAGCTTTTATAC AAAATAATATTTGCTTTGTTCAGAAAAAAAAGTTAAAAAA]
[-] EMBL CD074600             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTAATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCAAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTTTGACATATTTTTCATGACTTCCGGCTATCTG TTTTTTTACACATGTACCTATTTAGAGTAATATTTTACTTTCAAATCCTTTTATACATCGCTCTTTCATTGTTGATCAAACCTTTTTGTATGCTAACTATTTACTTGTTTATTTTTACTTTACTGTTAGCTTTTATACGAAAATAATATTTGC TTtataca                 ]
[+] EMBL SMAA85762            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAACACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCAAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATTTTTCATGACTTCCGGCTATCTGTTTTTTTTACCCATGTAC                                                                                                                                                                  ]
[+] EMBL SMAA8285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCAAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATTTTTCATGACTTCCGGCTATCTG TTTTTTTACACATGTACCTATTTAGAGTAATATTTTACTTTCAAATCCTTTTAAACA                                                                                                                          ]
[-] EMBL CD076716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATACCCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTTTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCAAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATTTTTCATGACTTCCGGCTATCTG TTTTTTTACACATGTACCTATTTAGAGTAATATTTTACTTTCAAATCCTTTTATACATCGCTCTTTCATTGTTGATCAAACCTTTTTGTATGCTAACTATTTACTTGTTTATTTTTACTTTACTGTTAGCTTTTATAC AAAATAATATTT                            ]


>consensus_9886#0 NNTGAAGGCAGAAGATGTTGCCAATGTTTGAACCCGTCCAAAAAACTATTACCTGCAAAA TTCTTAGCTATGCTGGAAGCAGAATTACTTCGACATTTCCGCTTACCCGATAATTCGAAG TTAAATGTTTTTAGATGCAAACAACAAGATAGCTCATTGATTGAACATACTGTAATTCAC ATGCCTGGAATCACATTGTTATAAACGATCAGAGTCCACCCATTTCGTCAACTCCCGATA CATTATTTTCAACATTGCATCCTTCACATAGTTCATCAGATTCGTCTCATACAGACGATG AAGACAAGGAATTTCCACCTAAACGTGCTTTACGATTGGCTATTAGACGGTTATTGCAGC GTGTCAATCAATCACTTTTGATGTCAGAGAAGATGTGTCAATGTCATGCACTAAATCTTT GTTCACATAAGTCTGAAATTTGCGAGAAAGATAAGTTACCAATTCAACCTACTTCATCGG TGGATAATATAATTTGTCAAACTCCAAATACTTCAACACCATTCCATTCATATCCTTCTA CTTTTTCTTCATCTTCCGCTCAAATTACGAAACATTATCAAACATCTTCATTGATTTGTT GTGATACATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAA ATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTA ATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGT CGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAA AATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTT CATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCG ACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTATGCAAATA TATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGAC ATATTTTTCATGACTTCCGGCTATCTGTTTTTTTACACATGTACCTATTTAGAGTAATAT TTTACTTTCAAATCCTTTTATACATCGCTCTTTCATTGTTGATCAAACCTTTTTGTATGC TAACTATTTACTTGTTTATTTTTACTTTACTGTTAGCTTTTATACAAAATAATATTTGCT TGTTCAGAAAAAAAAGTTAAAAAA



consensusID : consensus_9886#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 892
fasta sequence
                              [CTCCGAGGCCAAAATTCGGCACGAGGAGATGTGTCAATGTCATGCACTAAATCTTTGTTACATAAGTCTGAAATTTGCGAGAAAGATAAGTTACCAATTCAACCTACTTCATCGGTGGATAATATAATTTGTCAAACTCCAAATACTTCAACACCACTCCATTCATATCCTTCTACTTTTTCTTCATCTTCCGCTCAAATTACGAAACATTATCAAACATCTTCATTGATTTGTTGTGATACATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAAATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTAATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTTATGCAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATTTTTCATGACTTNNCGCTATCTGTTTTTTACACATGTACCCTATTAAAGTNNATATTTACTTTTCAATCCTTTNATACATCGGCTCTTTCATTTGTTGATCAACCTTNTTGNATGCTAACTATTTACTTGNTTATTTTAACTTTACTGGAACCTTTTATACAAAAAATAATTG]

[+] EMBL CD079678             [CTCCGAGGCCAAAATTCGGCACGAGGAGATGTGTCAATGTCATGCACTAAATCTTTGTTACATAAGTCTGAAATTTGCGAGAAAGATAAGTTACCAATTCAACCTACTTCATCGGTGGATAATATAATTTGTCAAACTCCAAATACTTCAACACCACTCCATTCATATCCTTCTACTTTTTCTTCATCTTCCGCTCAAATTACGAAACATTATCAAACATCTTCATTGATTTGTTGTGATACATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAAATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTAATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTTATGCAATATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATTTTTCATGACTTNNCGCTATCTGTTTTTTACACATGTACCCTATTAAAGTNNATATTTACTTTTCAATCCTTTNATACATCGGCTCTTTCATTTGTTGATCAACCTTNTTGNATGCTAACTATTTACTTGNTTATTTTAACTTTACTGGAACCTTTTATACAAAAAATAATTG]
[+] EMBL SMAA85801            [                                                                                                                                                                                                                                                                                                                                                           TCAATGTAATTTTTCTACAGTACATCCCTTCGAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTA                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL SMAA85781            [                                                                                                                                                                                                                                                                                                                                                           TCAATGTAATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAACTTCGCTTCTTTCATTTGTTTTC                                                                                                                                                                                                                                                                                                                                         ]


>consensus_9886#1 CTCCGAGGCCAAAATTCGGCACGAGGAGATGTGTCAATGTCATGCACTAAATCTTTGTTA CATAAGTCTGAAATTTGCGAGAAAGATAAGTTACCAATTCAACCTACTTCATCGGTGGAT AATATAATTTGTCAAACTCCAAATACTTCAACACCACTCCATTCATATCCTTCTACTTTT TCTTCATCTTCCGCTCAAATTACGAAACATTATCAAACATCTTCATTGATTTGTTGTGAT ACATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAAATTCT CAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTAATTTT TCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGTCGCGG CGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAAAATAA CCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTTCATAA CTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCGACATT AGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTTATGCAATATATTC AGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGACATATT TTTCATGACTTNNCGCTATCTGTTTTTTACACATGTACCCTATTAAAGTNNATATTTACT TTTCAATCCTTTNATACATCGGCTCTTTCATTTGTTGATCAACCTTNTTGNATGCTAACT ATTTACTTGNTTATTTTAACTTTACTGGAACCTTTTATACAAAAAATAATTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9886#0      NNTGAAGGCAGAAGATGTTGCCAATGTTTGAACCCGTCCAAAAAACTATTACCTGCAAAA 60
consensus_9886#1      ------------------------------------------------------------
                                                                                  

consensus_9886#0      TTCTTAGCTATGCTGGAAGCAGAATTACTTCGACATTTCCGCTTACCCGATAATTCGAAG 120
consensus_9886#1      ------------------------------------------------------------
                                                                                  

consensus_9886#0      TTAAATGTTTTTAGATGCAAACAACAAGATAGCTCATTGATTGAACATACTGTAATTCAC 180
consensus_9886#1      ------------------------------------------------------------
                                                                                  

consensus_9886#0      ATGCCTGGAATCACATTGTTATAAACGATCAGAGTCCACCCATTTCGTCAACTCCCGATA 240
consensus_9886#1      ------------------------------------------------------------
                                                                                  

consensus_9886#0      CATTATTTTCAACATTGCATCCTTCACATAGTTCATCAGATTCGTCTCATACAGACGATG 300
consensus_9886#1      ------------------------------------------------------------
                                                                                  

consensus_9886#0      AAGACAAGGAATTTCCACCTAAACGTGCTTTACGATTGGCTATTAGACGGTTATTGCAGC 360
consensus_9886#1      ------------------------------------------------------------
                                                                                  

consensus_9886#0      GTGTCAATCAATCACTTTTGATGTCAGAGAAGATGTGTCAATGTCATGCACTAAATCTTT 420
consensus_9886#1      --CTCCGAGGCCAAAATTCGGCAC--GAGGAGATGTGTCAATGTCATGCACTAAATCTTT 56
                         **        *  ** *      *** ******************************

consensus_9886#0      GTTCACATAAGTCTGAAATTTGCGAGAAAGATAAGTTACCAATTCAACCTACTTCATCGG 480
consensus_9886#1      GTT-ACATAAGTCTGAAATTTGCGAGAAAGATAAGTTACCAATTCAACCTACTTCATCGG 115
                      *** ********************************************************

consensus_9886#0      TGGATAATATAATTTGTCAAACTCCAAATACTTCAACACCATTCCATTCATATCCTTCTA 540
consensus_9886#1      TGGATAATATAATTTGTCAAACTCCAAATACTTCAACACCACTCCATTCATATCCTTCTA 175
                      ***************************************** ******************

consensus_9886#0      CTTTTTCTTCATCTTCCGCTCAAATTACGAAACATTATCAAACATCTTCATTGATTTGTT 600
consensus_9886#1      CTTTTTCTTCATCTTCCGCTCAAATTACGAAACATTATCAAACATCTTCATTGATTTGTT 235
                      ************************************************************

consensus_9886#0      GTGATACATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAA 660
consensus_9886#1      GTGATACATCTTGTTCACGTGATGTATTACTGCATAGAAATCAGTCTAGCTCAATTTTAA 295
                      ************************************************************

consensus_9886#0      ATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTA 720
consensus_9886#1      ATTCTCAGACTTATTGTTCAGTCGATGAACAGTTTCGTGTTGACAGCGAATGTCAATGTA 355
                      ************************************************************

consensus_9886#0      ATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGT 780
consensus_9886#1      ATTTTTCTACAGTACATCCCTTCAAAAGTCATCTCAACAAACAACAGGAAAAGTGTCTGT 415
                      ************************************************************

consensus_9886#0      CGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAA 840
consensus_9886#1      CGCGGCGAGGCTACTTAAAACTTCTAACTAGACGTCCCTACTTAAAGAAAACAAAACAAA 475
                      ************************************************************

consensus_9886#0      AATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTT 900
consensus_9886#1      AATAACCGGTTCATCACAATGTGACTTCACTTCTTTTTCACCACCTGTGTGTTTTTACTT 535
                      ************************************************************

consensus_9886#0      CATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCG 960
consensus_9886#1      CATAACTTCGCTTCTTTCATTTGTTTTCTCCAGAATTTTGCTTCATCCTACTACCTTGCG 595
                      ************************************************************

consensus_9886#0      ACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTT-ATGCAAAT 1019
consensus_9886#1      ACATTAGATCAACTTCTCAGTACTTTGTTCAAAGTATTGTGATGACCACTTTATGCAA-T 654
                      *************************************************** ****** *

consensus_9886#0      ATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGA 1079
consensus_9886#1      ATATTCAGATTAACTCAAGTGTCCTGGTGTCATTCGAGTTGCCATTAACCGAAACTCTGA 714
                      ************************************************************

consensus_9886#0      CATATTTTTCATGACTTCCGGCTATCTGTTTTTTTACACATGTACCTATTTAGAGTAATA 1139
consensus_9886#1      CATATTTTTCATGACTTNNCGCTATCTGTTTTTT-ACACATGTACCCTATTAAAGTNNAT 773
                      *****************   ************** ***********   *** ***    

consensus_9886#0      TTTTACTTTCAAATCCTTTTATACATCG-CTCTTTCATT-GTTGATCAAACCTTTTTGTA 1197
consensus_9886#1      ATTTACTTTTCAATCCTTTNATACATCGGCTCTTTCATTTGTTGATCAA-CCTTNTTGNA 832
                       ********  ******** ******** ********** ********* **** *** *

consensus_9886#0      TGCTAACTATTTACTTGTTTATTTTTACTTTACTGTTAGCTTTTATACAAAATAATATTT 1257
consensus_9886#1      TGCTAACTATTTACTTGNTTATTTTAACTTTACTGGAACCTTTTATACAAAA-AATAATT 891
                      ***************** ******* *********  * ************* **** **

consensus_9886#0      GCTTGTTCAGAAAAAAAAGTTAAAAAA 1284
consensus_9886#1      G-------------------------- 892
                      *                          




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)