These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9959#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 998 fasta sequence [AAGCGACTGAGAATTCTTCGTTACCCTTTACACACTCATCGACAAACAGTTCAAGGGACTCTAAAAATATCAGCCAAGATGAGGAGGGAACTCAAAATAATTTAAAAGCTTCTGTATTTAAACATGAACCACGGAAGCGCAAGTCACGGAATTACAGTAGCACAGTAATGGTGGAAGTAAATACAACCGGTCAGACAAATTCGTCATTTTTCCATTCTAATGAGAATATCATAACCAAAGGTGATGCCAAAAGTACTTTAAACTCTGATCAGGAATACCAATCTTCTTCCTGTGCGACGACTGTACCTATTCAACTAACTAACGCTTCAGGGGTTACGCCTAGTACTATGTGTGAACAATTATCTTATCCTT-TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTACTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTTATTACTTAACACCAGGCTA-GGTTTCAAATCTGTCTGT-AATACAGCTGCAATACAATCAATTCATCACATAAGATCAGATCTCAAGCCTATACCCTGTCATGATAGGCCACCATTCACACAGTATCATCGACAAAATGTCTCCTCTGCTANTAATGAATCCCCTAATAGGAAACGAAAGAGCACTTCAACTCGTGAAAACAAACCATCAATTCTTAAGCCATTTATCATTGCTTCAAAAACTGGTAGTGTTGTTACCAGTTCCAATACAGGTGTAATCACTCCATCTTTTAAAATAGACGCTTTACCAAGTTATATTATTGCAAACTTCATTCCAACGAATCTAGCATATGTGAATACGGTTTATTATTCATCTCCTGAAGAAGATTTTTTGTGGAAATCACAATTTTTCGGTAAGAAGAATGCTCAACAATTGATTCACACAGTAATCAGCTTATGTGCATGATCA] [+] EMBL CD194446 [AAGCGACTGAGAATTCTTCGTTACCCTTTACACACTCATCGACAAACAGTTCAAGGGACTCTAAAAATATCAGCCAAGATGAGGAGGGAACTCAAAATAATTTAAAAGCTTCTGTATTTAAACATGAACCACGGAAGCGCAAGTCACGGAATTACAGTAGCACAGTAATGGTGGAAGTAAATACAACCGGTCAGACAAATTCGTCATTTTTCCATTCTAATGAGAATATCATAACCAAAGGTGATGCCAAAAGTACTTTAAACTCTGATCAGGAATACCAATCTTCTTCCTGTGCGACGACTGTACCTATTCAACTAACTAACGCTTCAGGGGTTACGCCTAGTACTATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATA ] [+] EMBL CD157743 [ tcGGGGTTACGCCTAGTACTATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTCCTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTAATTACTTAACACCAGGCTA GGTTTCAAATCTGTCTGT AATACAGCTGCAATACAATCAATTCATCACATAAGATCAGATCTCAAGCCTATACCCTGTCATGATAGGCCACCATTCACACAGT ] [+] EMBL CD157588 [ ATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATG ] [+] EMBL CD090350 [ ATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTACTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTTATTACTTAACACCAGGCTA GGTCTCANATCTGTCTGTAAATACAGCTGC ATACAATCAATTCATCACAT ] [+] EMBL CD157572 [ ATGTGTGAACAATTATCTTATCCTT TCAGTCATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCG ] [+] EMBL CD090395 [ tgTATCCTTGTGAG AAAAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTACTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTTATTACTTAACACCAGGCTA GGTTTCAAATCTGTCTGT AATACAGCTGCAATACAATCAATTCATCACATAAGATCAGATCTNCAGCCTATACCCTGTCATGATAGGCCACCATTCACACAGTATCATCGACAAAATGTCTCCTCTGCTANTAATGAATCCC ] [+] EMBL CD157680 [ ttgATCCTT GTAGGAATAATGTAATCACTCATACCTCATCATCTGTTTCCAGTCGACCAAAGTGTTCAATAAATCATGCTCCACTTTCATCGAATGCAGTTCGAAGGTCAATGAGTACTTCACGTAGACCAATATTACCAAATCACCTAAGGAAGTATCCAAATACTTTATTACTTAACACCAGGCTA GGTTTCAAATCTGTCTGT ATACAGCTGC ATACAATCAA TCATCACAT AGATCAG ] [-] EMBL CD090373 [ caGCTAGGGTTTCAAATCTGTCTGT AATACAGCTGCAATACAATCAATTCATCACATAAGATCAGATCTCAAGCCTATACCCTGTCATGATAGGCCACCATTCACACAGTATCATCGACAAAATGTCTCCTCTGCTATAAATGAATCCTCTAATAGGAAACGAAAGAGCACTTCAACTCGTGAAAACAAACCATCAATTCTTAAGCCATTTATCATTGCTTCAAAAACTGGTAGTGTTGTTACCAGTTCCAATACAGGTGTAATCACTCCATCTTTTAAAATAGACGCTTTACCAAGTTATATTATTGCAAACTTCATTCCAACGAATCTAGCATATGTGAGTACGGTTTATTATTCATCT ] [-] EMBL CD147970 [ AAACAAACCATCAATTCTTAAGCCATTTATCATTGCTTCAAAAACTGGTAGTGTTGTTACCAGTTCCAATACAGGTGTAATCACTCCATCTTTTAAAATA ] [-] EMBL CD157688 [ TTTTANAATAGACGCTTTACCAAGTTATATTATTGCAAACTTCATTCCAACGAATCTAGCATATGTGAATACGGTTTATTATTCATCTCCTGAAGAAGATTTTTTGTGGAAATCACAATTTTTCGGTAAGAAGAATGCTC ] [-] EMBL CD090364 [ TAGACGCTTTACCAAGTTATATTATTGCAAACTTCATTCCAACGAATCTAGCATATGTGAATACGGTTTATTATTCATCTCCTGAAGAAGATTTTTTGTGGAAATCACAATTTTTCGGTAAGAAGAATGCTCAACAATTGATTCACACAGTAATCAGCTTATGTGCATG ] [-] EMBL CD157782 [ CGAATGTAGCATATGTGAATACGGTTTATTATTCATCTCCTGAAGAAGATTTTTTGTGGAAATCACAATTTTTCGGTAAGAAGAATGCTCAGCAATTGATTTACACATTAATTTACTTATTTGCcaaatca] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||