Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1590 cluster # 1590       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1590#0 length = 1207 sequences # 3  

consensusID : consensus_1590#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1207
fasta sequence
                              [TCTGTACAATACCAATATTTTCGCCACCCTGGATATCATTTTTTGTCCATAATCCAGGATACAGAGCCACAGCAACCCTGCTTGAAGCACAACACAAGACAACCAGACACATATATCATTTTTTTTTCTTTTTTCCATTTCAGGAAATGTGTTGCAATCAACATTTTGGCAATCAAATATATATGAGCTGCTTCTCATGTTATCATTCCATAAAATAACAAAACTAAATTAAAGGAATGCCCCAAGTTAGATGATCCCATGTGATCCTCTGTCAGGATTGATCGGGGATTTGACAAAACATTGACAGCATATACGAATCTGCTCCCATCTCCATGGCGACAGCTGCAGCGAAGCAAAAGGCAGACTGGAGAACAGAGGAAGGCAGACACAAAGACAACACAATAGCCATGTATTCCTTTGAAACCTTGATCCATCGGGGTATCTAAAAACTAAAACACAGGAAAGATGGTGAGCTTACTCTTGTATGACATAAACGATGAGGCGGAACATATTTAACAGCGTAAACATCGATATCACCATCACGTCTGCAGAACTGAAACCACCAGTTCTTTCAGAGCAGAAACCGCTGATCTGTAGTTAGCTTTGATGATGCCCATTATGCTATACGGATGCTTACAGATTGGATGTTTTCTTGGCCTGCTGACTTGAGATGGATCAAAGAAGCAGACACAGACGCGGCGTTCCCGGCCGTTGCCAGGCAGCCAGCAGCTGCATGAGCCAATCAGACATGACAGTAAGATCATTCTTCCTGTTCAACTAATGGTGAATGCAGGCATGGAACCATCAACTCCACGTGCTGTCTGGAGGCCTGAACTGATGCTCTGGAGTCTTCATCAGCCTCAGCTCTTAGGGAAAGTAAAGAAACACTAAACCCTCACCTGAGCCACCGAATGAAAGGGAAAGTCTGAAAAAAGGCTAAATTTGTATTCAGTACTCACTATACAAAACCTCTAGATGCTCCAACTTCACAGGTAGTTTAGGATTCTTGTTGTCCACTCCTTTATCCTAAAACCATAATGCCAGACTCTGGACAGAGAATAATGGGCCACAAACCAATGACGACATCATATCCCACTAATTTATTTACACTTCAGGGGACAAACACTGACAAGACTTGCATAATCCTCTCTTTTTAATTGCCTCCTTGGCTCCGAAAAGGAGGACAGATTCATCTGAGCTAGCTCTC]

[+] EMBL CA331642             [TCTGTACAATACCAATATTTTCGCCACCCTGGATATCATTTTTTGTCCATAATCCAGGATACAGAGCCACAGCAACCCTGCTTGAAGCACAACACAAGACAACCAGACACATATATCATTTTTTTTTCTTTTTTCCATTTCAGGAAATGTGTTGCAATCAACATTTTGGCAATCAAATATATATGAGCTGCTTCTCATGTTATCATTCCATAAAATAACAAAACTAAATTAAAGGAATGCCCCAAGTTAGATGATCCCATGTGATCCTCTGTCAGGATTGATCGGGGATTTGACAAAACATTGACAGCATATACGAATCTGCTCCCATCTCCATGGCGACAGCTGCAGCGAAGCAAAAGGCAGACTGGAGAACAGAGGAAGGCAGACACAAAGACAACACAATAGCCATGTATTCCTTTGAAACCTTGATCCATCGGGGTATCTAAAAACTAAAACACAGGAAAGATGGTGAGCTTACTCTTGTATGACATAAACGATGAGGCGGAACATATTTAACAGCGTAAACATCGATATCACCATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA332494             [                                                                                                                                             AGGAAATGTGTTGCAATCAACATTTTGGCAATCAAATATATATGAGCTGCTTCTCATGTTATCATTCCATAAAATAACAAAACTAAATTAAAGGAATGCCCCAAGTTAGATGATCCCATGTGATCCTCTGTCAGGATTGATCGGGGATTTGACAAAACATTGACAGCATATACGAATCTGCTCCCATCTCCATGGCGACAGCTGCAGCGAAGCAAAAGGCAGACTGGAGAACAGAGGAAGGCAGACACAAAGACAACACAATAGCCATGTATTCCTTTGAAACCTTGATCCATCGGGGTATCTAAAAACTAAAACACAGGAAAGATGGTGAGCTTACTCTTGTATGACATAAACGATGAGGCGGAACATATTTAACAGCGTAAACATCGATATCACCATCACGTCTGCAGAACTGAAACCACCAGTTCTTTCAGAGCAGAAACCGCTGATCTGTAGTTAGCTTTGATGATGCCCATTATGCTATACGGATGCTTACAGATTGGATGTTTTCTTGGCCTGCTGACTTGAGATGGATCAAAGAAGCAGACACAGACGCGGCGTTCCCGGCCGTTGCCAGGCAGCCAGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CA589261             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGATGATGCCCATTATGCTATACGGATGCTTACAGATTGGATGTTTTCTTGGCCTGCTGACTTGAGATGGATCAAAGAAGCAGACACAGACGCGGCGTTCCCGGCCGTTGCCAGGCAGCCAGCAGCTGCATGAGCCAATCAGACATGACAGTAAGATCATTCTTCCTGTTCAACTAATGGTGAATGCAGGCATGGAACCATCAACTCCACGTGCTGTCTGGAGGCCTGAACTGATGCTCTGGAGTCTTCATCAGCCTCAGCTCTTAGGGAAAGTAAAGAAACACTAAACCCTCACCTGAGCCACCGAATGAAAGGGAAAGTCTGAAAAAAGGCTAAATTTGTATTCAGTACTCACTATACAAAACCTCTAGATGCTCCAACTTCACAGGTAGTTTAGGATTCTTGTTGTCCACTCCTTTATCCTAAAACCATAATGCCAGACTCTGGACAGAGAATAATGGGCCACAAACCAATGACGACATCATATCCCACTAATTTATTTACACTTCAGGGGACAAACACTGACAAGACTTGCATAATCCTCTCTTTTTAATTGCCTCCTTGGCTCCGAAAAGGAGGACAGATTCATCTGAGCTAGCTCTC]


>consensus_1590#0 TCTGTACAATACCAATATTTTCGCCACCCTGGATATCATTTTTTGTCCATAATCCAGGAT ACAGAGCCACAGCAACCCTGCTTGAAGCACAACACAAGACAACCAGACACATATATCATT TTTTTTTCTTTTTTCCATTTCAGGAAATGTGTTGCAATCAACATTTTGGCAATCAAATAT ATATGAGCTGCTTCTCATGTTATCATTCCATAAAATAACAAAACTAAATTAAAGGAATGC CCCAAGTTAGATGATCCCATGTGATCCTCTGTCAGGATTGATCGGGGATTTGACAAAACA TTGACAGCATATACGAATCTGCTCCCATCTCCATGGCGACAGCTGCAGCGAAGCAAAAGG CAGACTGGAGAACAGAGGAAGGCAGACACAAAGACAACACAATAGCCATGTATTCCTTTG AAACCTTGATCCATCGGGGTATCTAAAAACTAAAACACAGGAAAGATGGTGAGCTTACTC TTGTATGACATAAACGATGAGGCGGAACATATTTAACAGCGTAAACATCGATATCACCAT CACGTCTGCAGAACTGAAACCACCAGTTCTTTCAGAGCAGAAACCGCTGATCTGTAGTTA GCTTTGATGATGCCCATTATGCTATACGGATGCTTACAGATTGGATGTTTTCTTGGCCTG CTGACTTGAGATGGATCAAAGAAGCAGACACAGACGCGGCGTTCCCGGCCGTTGCCAGGC AGCCAGCAGCTGCATGAGCCAATCAGACATGACAGTAAGATCATTCTTCCTGTTCAACTA ATGGTGAATGCAGGCATGGAACCATCAACTCCACGTGCTGTCTGGAGGCCTGAACTGATG CTCTGGAGTCTTCATCAGCCTCAGCTCTTAGGGAAAGTAAAGAAACACTAAACCCTCACC TGAGCCACCGAATGAAAGGGAAAGTCTGAAAAAAGGCTAAATTTGTATTCAGTACTCACT ATACAAAACCTCTAGATGCTCCAACTTCACAGGTAGTTTAGGATTCTTGTTGTCCACTCC TTTATCCTAAAACCATAATGCCAGACTCTGGACAGAGAATAATGGGCCACAAACCAATGA CGACATCATATCCCACTAATTTATTTACACTTCAGGGGACAAACACTGACAAGACTTGCA TAATCCTCTCTTTTTAATTGCCTCCTTGGCTCCGAAAAGGAGGACAGATTCATCTGAGCT AGCTCTC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)