Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1941 cluster # 1941       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1941#0 length = 563 sequences # 3  

consensusID : consensus_1941#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 563
fasta sequence
                              [CTGGATTTTTTCAAAAATGCATCACCAGCATTTGTATCCTGTGATAACCTGCGTGCAAATTTCAAATTTACTTACAGCAGCTGAGTTGTGAAAACCTCCAACACTTCTCATATTTCAGCTTTTTGATCAACAACAAGGTGATAAATCACAGCATGCAGTTGACTTTAGTTCGTATTTCAGGTCTTTTATTGTGTTTAAAAAGCCTGAAAGTTTCATTATGATAAACAAAGGTGAAAATAGACTCACTGCTCTGAATGTGTTTACATGTTTATAACTTAACATCTTGACAAAACCTCTGTGTCTGCATATTAAGCAGTGATTGACAATCGCCTGTTGGACCTGTGTTTATTAAGATTTTACCAGCACTGTTCAGCCATTCAAGTTAAAGACAAATAGTATTGTTTTTTTAAAGGATCAAACCAATGCTTGATGACACTGATAGGTTTTTGCGTGTTCTAAAAAGTAAAATTTTGTGTCATAATTTGGTCACTACGTTTGTGTTGTAGGGATAACATGTGTCCACTAGATGTCGCCATATTCCAATAAACTCCTTACCGATATAA]

[-] EMBL CA332614             [CTGGATTTTTTCAAAAATGCATCACCAGCATTTGTATCCTGTGATAACCTGCGTGCAAATTTCAAATTTACTTACAGCAGCTGAGTTGTGAAAACCTCCAACACTTCTCATATTTCAGCTTTTTGATCAACAACAAGGTGATAAATCACAGCATGCAGTTGACTTTAGTTCGTATTTCAGGTCTTTTATTGTGTTTAAAAAGCCTGAAAGTTTCATTATGATAAACAAAGGTGAAAATAGACTCACTGCTCTGAATGTGTTTACATGTTTATAACTTAACATCTTGACAAAACCTCTGTGTCTGCATATTAAGCAGTGATTGACAATCGCCTGTTGGACCTGTGTTTATTAAGATTTTACCAGCACTGTTCAGCCATTCAAGTTAAAGACAAATAGTATTG TTTTTTAAAGGATCAAACCAATGCTTGATGACACTGATAGGTTTTTGCGTGTTCTAAAAAGTAAAATTTTGTGTCATAATTTGGTCACTACGTTTGTGTTGTAGGGATAACATGTGTCCACTAGATGTCGCCATATTCCAATAAACTCCTTACCGATAT  ]
[+] EMBL CA591220             [                                                                                                                                    ACAAGGTGATAAATCACAGCATGCAGTTGACTTTAGTTCGTATTTCAGGTCTTTTATTGTGTTTAAAAAGCCTGAAAGTTTCATTATGATAAACAAAGGTGAAAATAGACTCACTGCTCTGAATGTGTTTACATGTTTATAACTTAACATCTTGACAAAACCTCTGTGTCTGCATATTAAGCAGTGATTGACAATCGCCTGTTGGACCTGTGTTTATTAAGATTTTACCAGCACTGTTCAGCCATTCAAGTTAAAGACAAATAGTATTGTTTTTTTAAAGGATCAAACCAATGCTTGATGACACTGATAGGTTTTTGCGTGTTCTAAAAAGTAAAATTTTGTGTCATAATTTGGTCACTACGTTTGTGTTGTAGGGATAACATGTGTCCACTAGATGTCGCCATATTCCAATAAACTCCTTACCGATATAA]
[-] EMBL CA332463             [                                                                                                                                                                   TTTAGTTCGTATTTCAGGTCTTTTATTGTGTTTAAAAAGCCTGAAAGTTTCATTATGATAAACAAAGGTGAAAATAGACTCACTGCTCTGAATGTGTTTACATGTTTATAACTTAACATCTTGACAAAACCTCTGTGTCTGCATATTAAGCAGTGATTGACAATAGCCTGTTGGACCTGTGTTTATTAAGATTTTACCAGCACTGTTCAGCCATTCAAGTTAAAGACAAATAGTATTGTTTTTTTAAAGGATCAAACCAATGCTTGATGACACTGATAGGTTTTTGCGTGTTCTAAAAAGTAAAATTTTGTGTCATAATTTGGTCACTACGTTTGTGTTGTAGGGATAACATGTGTCCACTAGATGTCGCCATATTCCAATAAACTCCTTTCC       ]


>consensus_1941#0 CTGGATTTTTTCAAAAATGCATCACCAGCATTTGTATCCTGTGATAACCTGCGTGCAAAT TTCAAATTTACTTACAGCAGCTGAGTTGTGAAAACCTCCAACACTTCTCATATTTCAGCT TTTTGATCAACAACAAGGTGATAAATCACAGCATGCAGTTGACTTTAGTTCGTATTTCAG GTCTTTTATTGTGTTTAAAAAGCCTGAAAGTTTCATTATGATAAACAAAGGTGAAAATAG ACTCACTGCTCTGAATGTGTTTACATGTTTATAACTTAACATCTTGACAAAACCTCTGTG TCTGCATATTAAGCAGTGATTGACAATCGCCTGTTGGACCTGTGTTTATTAAGATTTTAC CAGCACTGTTCAGCCATTCAAGTTAAAGACAAATAGTATTGTTTTTTTAAAGGATCAAAC CAATGCTTGATGACACTGATAGGTTTTTGCGTGTTCTAAAAAGTAAAATTTTGTGTCATA ATTTGGTCACTACGTTTGTGTTGTAGGGATAACATGTGTCCACTAGATGTCGCCATATTC CAATAAACTCCTTACCGATATAA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)