Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2028 cluster # 2028       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2028#0 length = 541 sequences # 4  

consensusID : consensus_2028#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 541
fasta sequence
                              [TAATGGCTACGGCAGCATGTTAAAGGGAAAACCAACTT-GGAAAAACAAAAACAACCACATTTTCGGGGTTTTATCGGTTGTATGCCGTAAATTCCAT-TATAATTTGAGATCCAACTACATTTAAACCGAGTTAGTTCCGCAAAAACGTCAGCGATTCCGAAACAATATGCCTCATCGAAAGAAGAAGTCGTTTATTGAGAAGAAGAAGGCCGTGACCTTCCACCTCGTCCACAGGAGTCAGAAGGACCCCCTAGCAGCAGATGAAAAAGCTCCTCAGCACGTTCTCTTGCCTGCCCCCACGGCGGATACAGAGAAGCGACGCGAGGAGCAAAGGAACTTTGGCGTTTTC-TTTGACGATGACTACGACTACTTGCAGCATCTGAAGGAATCGTCTGGCCCGATCCAGCTGGTGGCATCTGGGCCATCCCACAATGAAGAAGCTGAGGATGAGGAGGAAGACCACTCAGACATGGCCCTGCCTGCGGCTTCCATCAATCTTCCGTCCTCTGTGTTCGCCTCAGAGTTTGAAGAAGAGGTTGGA]

[+] EMBL BU807535             [TAATGGCTACGGCAGCATGTTAAAGGGAAAACCAACTTGGGAAAAACAAAAACAACCACATTTTCGGGGTTTTATCGGTTGTATGCCGTAAATTCCAT TATAATTTGAGATCCAACTACATTTAAACCGAGTTAGTTCCGCAAAAACGTCAGCGATTCCGAAACAATATGCCTCATCGAAAGAAGAAGTCGTTTATTGAGAAGAAGAAGGCCGTGACCTTCCACCTCGTCCACAGGAGTCAGAAGGACCCCCTAGCAGCAGATGAAAAAGCTCCTCAGCACGTTCTCTTGCCTGCCCCCACGGCGGATACAGAGAAGCGACGCGAGGAGCAAAGGAACTTTGGCGTTTTC TTTGACGATGACTACGACTACTTGCAGCATCTGAAGGAATCGTCTGGCCCGATCCAGCTGGTGGCATCTGGGCCATCCCACAATGAAAAAGCTGAGGAGGAGGAGGAAGACCACTCAGACATGGCCCTGCCTGCGGCTTCCATCAATCTTCCGTCCTCTGTGTTCGCCTCAGAGTTTGAAGAAGAGGTT   ]
[+] EMBL CA589982             [       TACGGCAGCATGTTAAAGGGAAAACCAACTT GGAAAAACAAAAACAACCACATTTTCGGGGTTTTATCGGTTGTATGCCGTAAATTCCAC TATAATTTGAGATCCAACTACATTTAAACCGAGTTAGTTCCGCAAAAACGTCAGCGATTCCGAAACAATATGCCTCATCGAAAGAAGAAGTCGTTTATTGAGAAGAAGAAGGCCGTGACCTTCCACCTCGTCCACAGGAGTCAGAAGGACCCCCTAGCAGCAGATGAAAAAGCTCCTCAGCACGTTCTCTTGCCTGCCCCCACGGCGGATACAGAGAAGCGACGCGAGGAGCAAAGGAACTTTGGCGTTTTC TTTGACGATGACTACGACTACTTGCAGCATCTGAAGGAATCGTCTGGCCCGATCCAGCTGGTGGCATCTGGGCCATCCCACAATGAAGAAGCTGAGGATGAGGAGGAGGACCACTCAGACATGGCCCTGCCTGCGGCTTCCATCAATCTTCCGTCCTCTGTGTTCGCCTCAGAGTTTGAAGAAGAGGTTGGA]
[+] EMBL CA590634             [       TACGGCAGCATGTTAAAGGGAAAACCAACTT GGAAAAACAAAAACAACCACATTTTCGGGGTTTTATCGGTTGTATGCCGTAAATTCCAT TATAATTTGAGATCCAACTACATTTAAACCGAGTTAGTTCCGCAAAAACGTCAGCGATTCCGAAACAATATGCCTCATCGAAAGAAGAAGTCGTTTATTGAGAAGAAGAAGGCCGTGACCTTCCACCTCGTCCACAGGAGTCAGAAGGACCCCCTAGCAGCAGATGAAAAAGCTCCTCAGCACGTTCTCTTGCCTGCCCCCACGGCGGATACAGAGAAGCGACGCGAGGAGCAAAGGAACTTTGGCGTTTTC TTTGACGATGACTACGACTACTTGCAGCATCTGAAGGAATCGTCTGGCCCGATCCAGCTGGTGGCATCTGGGCCATCCCACAATGAAGAAGCTGAGGATGAGGAGGAAGACCACTCAGACA                                                                       ]
[+] EMBL FR0059553            [                                                        CACATTTTCGGTGTTTTATCGGTTGTATGCCGTAAATTCGGTGTATAATTTGAGATCCAACTACATTTAAACCGAGTTAGTTCCGCAAAAACGTCAGCGATTCCGAAACAATATGCCTCATCGAAAGAAGAAGTCGTTTATTGAGAAGAAGAAGGCCGTGACCTTCCACCTCGTCCACAGGAGTCAGAAGGACCCCCTAGCAGCAGATGAAAAAGCTCCTCAGCACGTTCTCTTGCCTGCCCCCACGGCGGATACAGAAAAGCGACGCGAGGAGCAAAGGAACTTTGGCGGTTTCTTTTGACGATGACTACGACTACTTGCAGCATCTGAAGGAATCGTCTGGTCCGATCCAGCTGGT GCATCTGGGCCATCCCACAATGAAG AGCTGAGGATG                                                                                            ]


>consensus_2028#0 TAATGGCTACGGCAGCATGTTAAAGGGAAAACCAACTTGGAAAAACAAAAACAACCACAT TTTCGGGGTTTTATCGGTTGTATGCCGTAAATTCCATTATAATTTGAGATCCAACTACAT TTAAACCGAGTTAGTTCCGCAAAAACGTCAGCGATTCCGAAACAATATGCCTCATCGAAA GAAGAAGTCGTTTATTGAGAAGAAGAAGGCCGTGACCTTCCACCTCGTCCACAGGAGTCA GAAGGACCCCCTAGCAGCAGATGAAAAAGCTCCTCAGCACGTTCTCTTGCCTGCCCCCAC GGCGGATACAGAGAAGCGACGCGAGGAGCAAAGGAACTTTGGCGTTTTCTTTGACGATGA CTACGACTACTTGCAGCATCTGAAGGAATCGTCTGGCCCGATCCAGCTGGTGGCATCTGG GCCATCCCACAATGAAGAAGCTGAGGATGAGGAGGAAGACCACTCAGACATGGCCCTGCC TGCGGCTTCCATCAATCTTCCGTCCTCTGTGTTCGCCTCAGAGTTTGAAGAAGAGGTTGG A



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)