These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2484#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1497 fasta sequence [CGCCAGCCAGAAGAACCATTGAAGGGCTGATCCCAACGAGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGGGAGGTGAGATTGGCCTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGCAAGCCCATCAGCAACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACCTGGATCATGGCCTCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCTGAGGGCATGCAGTGTTCATGCGGAGTCGACTACTACACCCGTGCAGAGGGATTCAATAACGAGTCCTTTGTTATCTACATGTTCGTCTGCCACTTCCTCATTCCACTGATAATCATCTTCTTCTGCTACGGCCGTCTGCTCTGCGCCGTCAAGGAGGCCGCTGCTGCCCAGCAAGAGTCCGAGACCACCCAGAGGGCTGAGAGGGAGGTCACCCGCATGGTCATTCTCATGGTCATTTCCTTCCTGGTATGTTGGTTACCATATGCTGGTGTGGCCTGGTACATCTTCACACATCAGGGCTCTGAGTTTGGACCCGTCTTCATGACCATCCCGGCCTTCTTTGCCAAGAGCTCCTCCATCTACAACCCGATGATCTACATCTGCATGAACAAGCAGTTCCGCCACTGCATGATCACCACCTTGTGCTGCGGGAAGAACCCCTTCGAGGAGGAAGAGGGCGCGTCCACTACTTCCAAGACCGAGGCCTCTTCCGTCTCCTCCAGTTCTGTGTCTCCTGCGTAAAGGGGCTTTCACCACAGCCTCAAGGGTCCGTCACACGAGAAGAAGACTTCTGCACCCCCGGGAAACGACTGCAGGCTCACATCCACAGAAACAACCTCCTTTTTTTTTTGTATTTTTACAAACAAGTTGGTTCAACGTACAGACAGTCTCAGGGAAGGTCCTGTATATAAAACCAACTTGTTTACTATCTGAGTTTTTTTTTTTCCTCAAAGGAAGGGAAAAAAATCTTTTACAGTTGGATCCTATATGATACTGGCTTATTTTTGAACGTAGAAGCATGTAATCGAGGCAAATTAAAGGCAAATAAAATGCACTTTGCAAATTACTTTTTCCGTTGATGTTTTACTTGCAGTTTGGGTGAATGTAGCAGATGAATAAATGTGAATA] [+] EMBL CA340912 [CGCCAGCCAGAAGAACCATTGAAGGGCTGATCCCAACGAGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGNGAGGTGAGATTGGCCTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGCAAGCCCATCAGCAACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACCTGGATCATGGCCTCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCTGAGGGC ] [+] EMBL AF201471 [ AACCATTGAAGGGCTGATCCCAACGAGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGGGAGGTGAGATTGGCCTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGCAAGCCCATCAGCAACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACCTGGATCATGGCCTCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCTGAGGGCATGCAGTGTTCATGCGGAGTCGACTACTACACCCGTGCAGAGGGATTCAATAACGAGTCCTTTGTTATCTACATGTTCGTCTGCCACTTCCTCATTCCACTGATAATCATCTTCTTCTGCTACGGCCGTCTGCTCTGCGCCGTCAAGGAGGCCGCTGCTGCCCAGCAAGAGTCCGAGACCACCCAGAGGGCTGAGAGGGAGGTCACCCGCATGGTCATTCTCATGGTCATTTCCTTCCTGGTATGTTGGTTACCATATGCTGGTGTGGCCTGGTACATCTTCACACATCAGGGCTCTGAGTTTGGACCCGTCTTCATGACCATCCCGGCCTTCTTTGCCAAGAGCTCCTCCATCTACAACCCGATGATCTACATCTGCATGAACAAGCAGTTCCGCCACTGCATGATCACCACCTTGTGCTGCGGGAAGAACCCCTTCGAGGAGGAAGAGGGCGCGTCCACTACTTCCAAGACCGAGGCCTCTTCCGTCTCCTCCAGTTCTGTGTCTCCTGCGTAAAGGGGCTTTCACCACAGCCTCAAGGGTCCGTCACACGAGAAGAAGACTTCTGCACCCCCGGGAAACGACTGCAGGCTCACATCCACAGAAACAACCTCCTTTTTTTTTTGTATTTTTACAAACAAGTTGGTTCAACGTACAGACAGTCTCAGGGAAGGTCCTGTATATAAAACCATCCGACTTACTATCTGAGTTTTTTTTTTTCCTCAAAGGAAGGGAAAAAAATCTTTTACAGTTGGATCCTATATGATACTGGCTTATTTTTGAACGTAGAAGCATGTAATCGAGGCAAATTAAAGGCAAATAAAATGCACTTTGCAAATTACTTTTTCCGTTGATGTTTTACTTGCAGTTTGGGTGAATGTAGCAGATGAATAAATGTGAATA] [+] EMBL CA340992 [ AACCATTGAAGGGCTGATCCCAACGAGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGGGAGGTGAGATTGGCCTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGCAAGCCCATCAGCAACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACCTGGATCATGGCCTCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCTGAGGGCATGCAGTGTTCATGCGGAGTCGACTAC ] [+] EMBL FR0057677 [ AGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCCATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTTCCCAACCTGGGAGGTGAGATTGGCCTCTGGTC ] [+] EMBL FR0057702 [ AGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGATTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACAGCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGGTGCAA ] [+] EMBL CA341069 [ CTGCACCCCCGGGAAACGACTGCAGGCTCACATCCACAGAAACAACCTCCTTTTTTTTTTGTATTTTTACAAACAAGTTGGTTCAACGTACAGACAGTCTCAGGGAAGGTCCTGTATATAAAACCAACTTGT ] [+] EMBL CA341064 [ CTTTTTTTTTTGTATTTTTACAAACAAGTTGGTTCAACGTACAGACAGTCTCAGGGAAGGTCCTGTATATAAAACCAACTTGT ] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |