Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2484 cluster # 2484       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2484#0 length = 1497 sequences # 7  

consensusID : consensus_2484#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1497
fasta sequence
                              [CGCCAGCCAGAAGAACCATTGAAGGGCTGATCCCAACGAGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGGGAGGTGAGATTGGCCTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGCAAGCCCATCAGCAACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACCTGGATCATGGCCTCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCTGAGGGCATGCAGTGTTCATGCGGAGTCGACTACTACACCCGTGCAGAGGGATTCAATAACGAGTCCTTTGTTATCTACATGTTCGTCTGCCACTTCCTCATTCCACTGATAATCATCTTCTTCTGCTACGGCCGTCTGCTCTGCGCCGTCAAGGAGGCCGCTGCTGCCCAGCAAGAGTCCGAGACCACCCAGAGGGCTGAGAGGGAGGTCACCCGCATGGTCATTCTCATGGTCATTTCCTTCCTGGTATGTTGGTTACCATATGCTGGTGTGGCCTGGTACATCTTCACACATCAGGGCTCTGAGTTTGGACCCGTCTTCATGACCATCCCGGCCTTCTTTGCCAAGAGCTCCTCCATCTACAACCCGATGATCTACATCTGCATGAACAAGCAGTTCCGCCACTGCATGATCACCACCTTGTGCTGCGGGAAGAACCCCTTCGAGGAGGAAGAGGGCGCGTCCACTACTTCCAAGACCGAGGCCTCTTCCGTCTCCTCCAGTTCTGTGTCTCCTGCGTAAAGGGGCTTTCACCACAGCCTCAAGGGTCCGTCACACGAGAAGAAGACTTCTGCACCCCCGGGAAACGACTGCAGGCTCACATCCACAGAAACAACCTCCTTTTTTTTTTGTATTTTTACAAACAAGTTGGTTCAACGTACAGACAGTCTCAGGGAAGGTCCTGTATATAAAACCAACTTGTTTACTATCTGAGTTTTTTTTTTTCCTCAAAGGAAGGGAAAAAAATCTTTTACAGTTGGATCCTATATGATACTGGCTTATTTTTGAACGTAGAAGCATGTAATCGAGGCAAATTAAAGGCAAATAAAATGCACTTTGCAAATTACTTTTTCCGTTGATGTTTTACTTGCAGTTTGGGTGAATGTAGCAGATGAATAAATGTGAATA]

[+] EMBL CA340912             [CGCCAGCCAGAAGAACCATTGAAGGGCTGATCCCAACGAGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGNGAGGTGAGATTGGCCTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGCAAGCCCATCAGCAACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACCTGGATCATGGCCTCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCTGAGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AF201471             [             AACCATTGAAGGGCTGATCCCAACGAGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGGGAGGTGAGATTGGCCTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGCAAGCCCATCAGCAACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACCTGGATCATGGCCTCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCTGAGGGCATGCAGTGTTCATGCGGAGTCGACTACTACACCCGTGCAGAGGGATTCAATAACGAGTCCTTTGTTATCTACATGTTCGTCTGCCACTTCCTCATTCCACTGATAATCATCTTCTTCTGCTACGGCCGTCTGCTCTGCGCCGTCAAGGAGGCCGCTGCTGCCCAGCAAGAGTCCGAGACCACCCAGAGGGCTGAGAGGGAGGTCACCCGCATGGTCATTCTCATGGTCATTTCCTTCCTGGTATGTTGGTTACCATATGCTGGTGTGGCCTGGTACATCTTCACACATCAGGGCTCTGAGTTTGGACCCGTCTTCATGACCATCCCGGCCTTCTTTGCCAAGAGCTCCTCCATCTACAACCCGATGATCTACATCTGCATGAACAAGCAGTTCCGCCACTGCATGATCACCACCTTGTGCTGCGGGAAGAACCCCTTCGAGGAGGAAGAGGGCGCGTCCACTACTTCCAAGACCGAGGCCTCTTCCGTCTCCTCCAGTTCTGTGTCTCCTGCGTAAAGGGGCTTTCACCACAGCCTCAAGGGTCCGTCACACGAGAAGAAGACTTCTGCACCCCCGGGAAACGACTGCAGGCTCACATCCACAGAAACAACCTCCTTTTTTTTTTGTATTTTTACAAACAAGTTGGTTCAACGTACAGACAGTCTCAGGGAAGGTCCTGTATATAAAACCATCCGACTTACTATCTGAGTTTTTTTTTTTCCTCAAAGGAAGGGAAAAAAATCTTTTACAGTTGGATCCTATATGATACTGGCTTATTTTTGAACGTAGAAGCATGTAATCGAGGCAAATTAAAGGCAAATAAAATGCACTTTGCAAATTACTTTTTCCGTTGATGTTTTACTTGCAGTTTGGGTGAATGTAGCAGATGAATAAATGTGAATA]
[+] EMBL CA340992             [             AACCATTGAAGGGCTGATCCCAACGAGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGGGAGGTGAGATTGGCCTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGCAAGCCCATCAGCAACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACCTGGATCATGGCCTCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCTGAGGGCATGCAGTGTTCATGCGGAGTCGACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL FR0057677            [                                      AGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCCATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTTCCCAACCTGGGAGGTGAGATTGGCCTCTGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL FR0057702            [                                      AGCTGCAACCATGAACGGCACGGAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTATGATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATGTTCCTGCTCATCCTTCTCGGATTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAACACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTCTTCATGGTGTTCGGAGGATTCACCACAACGATGTACAGCTCTATGCACGGCTACTTTGTGCTTGGACGCCTTGGGTGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA341069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTGCACCCCCGGGAAACGACTGCAGGCTCACATCCACAGAAACAACCTCCTTTTTTTTTTGTATTTTTACAAACAAGTTGGTTCAACGTACAGACAGTCTCAGGGAAGGTCCTGTATATAAAACCAACTTGT                                                                                                                                                                                                              ]
[+] EMBL CA341064             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTTTTTTTTTTGTATTTTTACAAACAAGTTGGTTCAACGTACAGACAGTCTCAGGGAAGGTCCTGTATATAAAACCAACTTGT                                                                                                                                                                                                              ]


>consensus_2484#0 CGCCAGCCAGAAGAACCATTGAAGGGCTGATCCCAACGAGCTGCAACCATGAACGGCACG GAGGGACCATTTTTCTATGTCCCTATGGTAAACACCACCGGCGTCGTCCGGAGTCCTTAT GATTACCCTCAGTACTATCTCGTCAACCCAGCAGCTTACGCCGCTCTGGGGGCCTACATG TTCCTGCTCATCCTTCTCGGCTTCCCCATCAACTTCCTCACTCTGTATGTCACCATTGAA CACAAGAAGCTGCGGACCCCTCTAAACTACATCTTGCTCAACCTGGCAGTCGCCGACCTC TTCATGGTGTTCGGAGGATTCACCACAACGATGTACACCTCTATGCACGGCTACTTTGTG CTTGGACGCCTTGGTTGCAATCTGGAAGGCTTCTTCGCCACCCTGGGAGGTGAGATTGGC CTCTGGTCGCTAGTTGTTTTGGCTATTGAAAGGTGGGTGGTCGTCTGCAAGCCCATCAGC AACTTCCGCTTCGGGGAGAATCACGCAATCATGGGTTTGGCCTTCACCTGGATCATGGCC TCTGCCTGTGCCGTTCCCCCTCTCGTCGGCTGGTCCCGTTACATCCCTGAGGGCATGCAG TGTTCATGCGGAGTCGACTACTACACCCGTGCAGAGGGATTCAATAACGAGTCCTTTGTT ATCTACATGTTCGTCTGCCACTTCCTCATTCCACTGATAATCATCTTCTTCTGCTACGGC CGTCTGCTCTGCGCCGTCAAGGAGGCCGCTGCTGCCCAGCAAGAGTCCGAGACCACCCAG AGGGCTGAGAGGGAGGTCACCCGCATGGTCATTCTCATGGTCATTTCCTTCCTGGTATGT TGGTTACCATATGCTGGTGTGGCCTGGTACATCTTCACACATCAGGGCTCTGAGTTTGGA CCCGTCTTCATGACCATCCCGGCCTTCTTTGCCAAGAGCTCCTCCATCTACAACCCGATG ATCTACATCTGCATGAACAAGCAGTTCCGCCACTGCATGATCACCACCTTGTGCTGCGGG AAGAACCCCTTCGAGGAGGAAGAGGGCGCGTCCACTACTTCCAAGACCGAGGCCTCTTCC GTCTCCTCCAGTTCTGTGTCTCCTGCGTAAAGGGGCTTTCACCACAGCCTCAAGGGTCCG TCACACGAGAAGAAGACTTCTGCACCCCCGGGAAACGACTGCAGGCTCACATCCACAGAA ACAACCTCCTTTTTTTTTTGTATTTTTACAAACAAGTTGGTTCAACGTACAGACAGTCTC AGGGAAGGTCCTGTATATAAAACCAACTTGTTTACTATCTGAGTTTTTTTTTTTCCTCAA AGGAAGGGAAAAAAATCTTTTACAGTTGGATCCTATATGATACTGGCTTATTTTTGAACG TAGAAGCATGTAATCGAGGCAAATTAAAGGCAAATAAAATGCACTTTGCAAATTACTTTT TCCGTTGATGTTTTACTTGCAGTTTGGGTGAATGTAGCAGATGAATAAATGTGAATA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)