Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2563 cluster # 2563       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2563#0 length = 891 sequences # 8  

consensusID : consensus_2563#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 891
fasta sequence
                              [ATTCTCCTCGGAGTCATGTTTATAGCAGGTTTGGGACAAGCCGCCTTTTTTTCATACCCCCACGGCGGCGGTAAGAACGATCCTGTGCTGCAGTATGTTCTTAACAACTCGCTGAGAGAGCACCCAGTCCTGACCATAGCTCAGACTGAGAACCCTCGAGGACCGTTGGAGCAGAATGATGGTTGCCAGTGAACAGGCCCAGTTCATGGCACTTCTCATTAAGCTGATATATGCAACCAAAGCTATTGAGATCGGGATGTACACTGGCTACAATGCCCTGAGCATGGCCCTGGCGATGCCCCCTAACGGTCGGGTGGTGGCCTGCGAGATAGAGGAGGAGTACATCAACATCTCCAAACCGTTTTTCAAAGAGGCTGGAGTTGAGAATAAGATCGAGATCAGGCAGCAGTCGGCGGTGCAGACGCTGGATGACATGATAGAGGCGGGCGAGGCCGGAACCTATGACTTTGTGTTCATCGACGCCGATAAATCCAACTATGATTACTACTACGAGGCGTCCCTGCGGCTGGTGAGAAGAGGCGGCATCATCGCCATCGATAACGTGCTTTGGGGTGGAAAAGTAGTCAAACCCGCACTGGGTGACGTCACTTCCTGGGTCCTATACTCCCTCAATAAGAAGGTGCACGCGGACGAGCGGGTGGACCTGAGCATGCTCACCATGGGGGACGGGCTGACCCTCGCCGTCAGGCGCTGAAAACGAGCCCGCTTACATCCACAGGGGGGTCAGTTCGTATGTTCTGGAGGAAATTCTGTTCTGCAACCTTGAAAAATAAATTGAGCGGCGCAGTCAGATACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTGGGGGGGGCCCCCCCCCCCCTTTTTTTTCCCCT]

[+] EMBL CA333572             [ATTCTCCTCGGAGTCATGTTTATAGCAGGTTTGGGACAAGCCGCCTTTTTTTCATACCCCCACGGCGGCGATAAGAACGATCCTGTGCTGCAGTATGTTCTTAACAACTCGCTGAGAGAGCACCCAGTCCTGACCA AGCTCAAACTGAGAACCCTCGAGGACCGTTGGAGCAGAATGATGGTTGCCAGTGAACAGGCCCAGTTCATGGCACTTCTCATTAAGCTGATATATGCTACCAAAGCTATTGAGATCGGGATGTACACTGGCTACAATGCCCTGAGCATGGCCCTGGCGATGCCCCCTAACGGTCGGGTGGTGGCCTGCGAGATAGAGGAGGAGTACATCAACATCTCCAAACCGTTTTTCAAAGAGGCTGGAGTTGAGAATAAGATCGAGATCAGGCAGCAGTCGGCGGTGCAGACGCTGGATGACATGATAGAGGCGGGCGAGGCCGGAACCTATGACTTTGTGTTCATCGACGCCGATAAATCCAACTATGATTACTACTACGAGGCGTCCCTGCGGCTGGTGAGAAGAGGCGGCATCATCGCCATCGATAACGTGCTTTGGGGTGGAAAAGTAGTCAAACCCGCACTGGGTGACGTCACTTCCTGG                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA333551             [                                                       ACCCCCACGTCGGCTGTAAGAACGATCCTGTGCTGCAGTATGTTCTTAACAACTCACTGAGAAAGCACCCAGTCCTGACCATAGCTCAGACTGAGAACCCTCGAGGACCGTTGGAGCAGAATGATGGTTGCCAGTGAACAGGCCCAGTTCATGGCACTTCTCATTAAGCTGATATTTGCAACCAAAGCTATTGAGATCGGGATGTACACTGGCTACAATGCCCTGAGCATGGCCCTGGCGATGCCCCCTAACGGTCGGGTGGTGGCCTGCGAGATAGAGGAGGAGTACATCAACATCTCCAAACCGTTTTTCAAAGAGGCTGGAGTTGAGAATAAGATCGAGATCAGGCAGCAGTCGGCGGTGCAGACGCTGGATGACATGATAGAGGCGGGCGAGGCCGGAACCTATGACTTTGTGTTCATCGACGCCGATAAATCCAACTATGATTACTACTACGAGGCGTCCCTGCGGCTGGTGAGAAGAGGCGGCATCATCGCCATCGATAACGTG                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA333620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTGTTCATCGACGCCGATAAATCCAACTATGATTACTACTACGAGGCGTCCCTGCGGCTGGTGAGAAGAGGCGGCATCATCGCCATCGATAACGTGCTTTGGGGTGGAAAAGTAGTCAAACCCGCACTGGGTGACGTCACTTCCTGGGTCCTATACTCCCTCAATAAGAAGGTGCACGCGGACGAGCGGGTGGACCTGAGCATGCTCACCATGGGGGACGGGCTGACCCTCGCCGTCAGGCGCTGAAAACGAGCCCGCTTACATCCACAGGGGGGTCAGTTCGTATGTTCTGGAGGAAATTCTGTTCTGCAACCTTGAAAAATAAATTGAGTGGCGCAGTCAGAT                                                                             ]
[+] EMBL CA333566             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGGACCTGAGCATGCTCACCATGGGGGACGGGCTGACCCTCGCCGTCAGGCGCTGAAAACGAGCCCGCTTACATCCACAGGGGGGTCAGTTCGTATGTTCTGGAGGAAATTCTGTTCTGCAACCTTGAAAAATAAATTGAGTGGCGCAGTCA                                                                                ]
[+] EMBL CA331006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCATGCTCACCATGGGGGACGGGCTGACCCTCGCCGTCAGGCGCTGAAAACGAGCCCGCTTACATCCACAGGGGGGTCAGTTCGTATGTTCTGGAGGAAATTCTGTTCTGCAACCTTGAAAAATAAATTGAGCGGCGCAGTCAGATTCTT                                                                         ]
[+] EMBL CA333612             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATGCTCACCATGGGGGACGGGCTGACCCTCGCCGTCAGGCGCTGAAAACGAGCCCGCTTACATCCACAGGGGGGTCAGTTCGTATGTTCTGGAGGAAATTCTGTTCTGCAACCTTGAAAAATAAATTGAGCGGCGCAGTCAGATTCTTAAAA                                                                     ]
[+] EMBL FR0057887            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCTGACCCTCGCCGTCAGGCGCTGAAAACGAGCCCGCTTACATCCACAGGGGGGTCAGTTCGTATGTTCTGGAGGAAATTCTGTTCTGCAACCTTGAAAAATAAATTGAGCGGCGCAGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTGGGGGGGGCCCCCCCCCCCCTTTTTTTTCCCCT]
[+] EMBL CA330101             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCAGTTCGTATGTTCTGGAGGAAATTCTGTTCTGCAACCTTGAAAAATAAATTGAGCGGCGCAGTCAGAAA                                                                            ]


>consensus_2563#0 ATTCTCCTCGGAGTCATGTTTATAGCAGGTTTGGGACAAGCCGCCTTTTTTTCATACCCC CACGGCGGCGGTAAGAACGATCCTGTGCTGCAGTATGTTCTTAACAACTCGCTGAGAGAG CACCCAGTCCTGACCATAGCTCAGACTGAGAACCCTCGAGGACCGTTGGAGCAGAATGAT GGTTGCCAGTGAACAGGCCCAGTTCATGGCACTTCTCATTAAGCTGATATATGCAACCAA AGCTATTGAGATCGGGATGTACACTGGCTACAATGCCCTGAGCATGGCCCTGGCGATGCC CCCTAACGGTCGGGTGGTGGCCTGCGAGATAGAGGAGGAGTACATCAACATCTCCAAACC GTTTTTCAAAGAGGCTGGAGTTGAGAATAAGATCGAGATCAGGCAGCAGTCGGCGGTGCA GACGCTGGATGACATGATAGAGGCGGGCGAGGCCGGAACCTATGACTTTGTGTTCATCGA CGCCGATAAATCCAACTATGATTACTACTACGAGGCGTCCCTGCGGCTGGTGAGAAGAGG CGGCATCATCGCCATCGATAACGTGCTTTGGGGTGGAAAAGTAGTCAAACCCGCACTGGG TGACGTCACTTCCTGGGTCCTATACTCCCTCAATAAGAAGGTGCACGCGGACGAGCGGGT GGACCTGAGCATGCTCACCATGGGGGACGGGCTGACCCTCGCCGTCAGGCGCTGAAAACG AGCCCGCTTACATCCACAGGGGGGTCAGTTCGTATGTTCTGGAGGAAATTCTGTTCTGCA ACCTTGAAAAATAAATTGAGCGGCGCAGTCAGATACTTAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAACCTGGGGGGGGCCCCCCCCCCCCTTTTTTTTCCCCT



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)