Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2628 cluster # 2628       Sequences # 9       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2628#0 length = 785 sequences # 9  
consensusID : consensus_2628#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 785
fasta sequence 
                              [TGGCACGCTGTCAGCGGTTGCCCGGCTCCCGAGCTCTGAC-ACGAAAAGCCTAGAAAAATGAAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTCCCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACGTGCACTTATGTTCAGGAGCATTCTGTGGTTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCT-ACAAATATTTCTTTCACAAACATGGTGTCAGTGGACGAGAAGCTGACGTACAAACCGCATCCGCAGGATCCTGAAAAGACAGTGCTGACTCAGGAGGCCCTCATCAGTGTGAAGGGGGTCAGTCTTAGCAGCTACCTGGAGGGCCTGATGGCAAAAACCATCTCTGGCAACGCCAACAAGGGTCGGGAGGCCATGGAATGGGTCATCAGACGATTGAACACAGAAATCGAAGAGTTGGCAGCAACAGCGCGTGGAACTATGCGCGTTCCCATGGCAGCAGCCGTTGCAGACAAATGATGGCGTCCTGAACCAGTGGACCTCTCGGACATTTCCTCACACCTCGCGTGTCAGCGGAGCCTGACCACCACAGTCTCGTCCTCCGGCGCCTCCCCCGTCTTTGTGTGAATGTTGCTGGAGCTGTCCCCTGCGTCCACCCTCAACGG]

[+] EMBL CA591600             [TGTCACGCTGTCAGCGGTTGCCCGGCTCCCGAGCTCTGACTTCGAAAAGCCTAGAAAAATGAAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTCCCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACATGCACTTATGTTCAGGAGCATTCTGTGGTTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCT ACAAATATTTCTTTCACAAACATGGTGTCAGTGGACGAGAAGCTGACGTACAAACCGCATCCGCAGGATCCTGAAAAGACAGTGCTGACTCAGGAGGCCCTCATCAGTGTGAAGGGGGTCAGTCTTAGCAGCTACCTGGAGGGCCTGATGGCAAAAACCATCTCTGGCAACGCCAACAAGGGTCGGGAGGCCATGGAATGGGTCATCAGACGATTGAACACAGAAATCGAAGAGTTGGCAGCAACAGCGCGTGGAACTATGCGCGTTCCCATGGCAGCAGCCGTTGCAGACAAATGATGGCGTCCTGAACCAGTGGACCTCTCGGACATTTCCTCACACCTCGCGTGTCAGCGGAGCCTGACCACCACAGTCTCGTCCTCCGGCGCCTCCCCCGTCTTTGTGTGAATGTTGCTGGAGCTGTCCCCTGCGTCCACCCTCAACGG]
[+] EMBL CA591582             [  GTTCGCTGTCAGCGGTTGCCCGGCTCCCGAGCTCTGAC ACGTTAAGCCTAGTAAAATGAAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAATGGGGTCTCCCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACGTGCACTTATGTTCAGGAGCATTCTGTGGTTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCT ACAAATATTTCTTTCACAAACATGGTGTCAGTGGACGAGAAGCTGACGTACAAACCGCATCCGCAGGATCCTGAAAAGACAGTGCTGACTCAGGAGGCCCTCATCAGTGTGAAGGGGGTCAGTCTTAGCAGCTACCTGGAGGGCCTGATGGCAAAAACCATCTCTGGCAACGCCAACAAGGGTCGGGAGGCCATGGAATGGGTCATCAGACGATTGAACACAGAAATCGAAGAGTTGGCAGCAACAGCGCGTGGAACTATGCGCGTTCCCATGGCAGCAGCCGTTGCAGACAAATGATGGCGTCCTGAACCAGTGGACCTCTCGGACATTTCCTCACACCTCGCGTGTCAGCGGAGCCTGACCACCACAGTCTCGTCCTCCGGCGCCTCCCCCGTCTTTGTGTGAATGTTGCTGGA                           ]
[+] EMBL FR0063618            [                         CTCCCGAGCTCTGAC ACGAAAAGCCTAGAAAAATGAAGATCTGGGCGTCAGAGCACGTTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTCCCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACATGCACTTATGTTCAGGAGCATTCTGTGGTTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCT ACAAATATTTCTTTCACAAACATGGTGTCAGTGGACGAGAAGCTGACGTACAA                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BU806564             [                             CGAGCTCTGAC ACGAAAAGCCTAGAAAAATGAAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTCCCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACATGCACTTATGTTCAGGAGCATTCTGTGGTTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCT ACAAATATTTCTTTCACAAACATGGTGTCAGTGGACGAGAAGCTGACGTACAAACCGCATCCGCAGGATCCTGAAAAGACAGTGCTGACTCAGGAGGCCCTCATCAGTGTGAAGGGGGTCAGTCTTAGCAGCTACCTGGAGGGCCTGATGGCAAAAACCATCTCTGGCAACGCCAACAAGGGTCGGGAGGCCATGGGATGGGTCATCAGACGATTG ACACAGAAATCGAAGAG TGGCAGCCACAGCGCGTGGAACTATGCGCGT                                                                                                                                                                                 ]
[+] EMBL CA589722             [                               AGCTCTGAC ACGAAAAGCCTAGTAAAATGAAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTCCCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACGTGCACTTATGTTCAGGAGCATTCTGTGGTTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCT ACAAATATTTCTTTCACAAACATGGTGTCAGTGGACGAGAAGCTGACGTACAAACCGCATCCGCAGGATCCTGAAAAGACAGTGCTGACTCAGGAGGCCCTCATCAGTGTGAAGGGGGTCAGTCTTAGCAGCTACCTGGAGGGCCTGATGGCAAAAACCATCTCTGGCAACGCCAACAAGGGTCGGGAGGCCATGGAATGGGTCATCAGACGATTGAACACAGAAATCGAAGAGTTGGCAGCAACAGCGCGTGGAACTATGCGCGTT                                                                                                                                                                                ]
[+] EMBL BU805438             [                                GCTCTGAC ACGAAAAGCCTAGAAAAATGAAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTCCCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACATGCACTTATGTTCAGGAGCATTCTGTGGGTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCT ACAAATATTTCTTTCACAAACATGGTGTCAGTGGACGAGAAGCTGACGTACAAACCGCATCCGCAGGATCCTGAAAAGACAGTGCTGACTCAGGAGGCCCTCATCAGTGTGAAGGGGGTCAGTCTTAACAGCTACCTGGAGGGCCTGATGGCAAAAACCATCTCTGGC                                                                                                                                                                                                                                                                                   ]
[+] EMBL BU804657             [                                GCTCTGAC ACGAAAAGCCTAGTAAAATGAAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTCCCCTCCATGGTTTAAACTATCGCTGGGATATCAAAAACGTGCACTTATGTTCAGGAGCATTCTGTGGTTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCT ACAAATATTTCTTTCACAAACATGGTGTCAGTGGACGAGAAGCTGACGTACAAACCGCATCCGCAGGATCCTGAAAAGACAGTGCTGACTCAGGAGGCCCTCATCAGTGTGAAGGGGGTCAGTCTTAGCAGCTACCTGGAGGGCCTGATGGCAAAAACCATCTCTGGCAACGCCAACAAGGGTCGGGAGGCCATGGAATGGGTCATCAGACGATTGAACACAGAAATCGAAGAGTTGGCAGCAACAGCGCGTGGAACTATGCGCGTTCCCATGGCAGCAGCCGTTGCAGACAAATG                                                                                                                                                   ]
[+] EMBL FR0062696            [                                               AGCCTAGTAAAATGAAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTCCCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACGTGCACTTATGTTCAGGAGCATTCTGGGGTTGATCCTCAGGAGAAAACCTTTGAGCTCAAGTCTAACAAATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA330347             [                                                             AAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCAATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGAAGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTCCCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACGTGCACTTATGTTCAGGAGCATTCTGTGGTTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCT ACAAATATTTCTTTCACAAACATGGTGTCAGTGGACGAGAAGCTGACGTACAAACCGCATCCGCAGGATCCTGAAAAGACAGTGCTGACTCAGGAGGCCCTCATCAGTGTGAAGGGGGTCAGACTTAGCAGCTACCTGGAGGGCCTGATGGCAAAAACCATCTCTGGCAACGCCAACAAGGGTCGGGAGGCCATGGAATGGGTCATCAGACCATTGGACACAGAAATCGAAGAGTTGGCAGCAACAGCGCGTGGAACTATGCGCGTT                                                                                                                                                                                ]




>consensus_2628#0
TGGCACGCTGTCAGCGGTTGCCCGGCTCCCGAGCTCTGACACGAAAAGCCTAGAAAAATG
AAGATCTGGGCGTCAGAGCACATTTTCAATCACCCCTGGGAGACGGTGATCAAGGCAGCA
ATGCAGAAGTACCCCAACCCCATGAACCCCGGTGTGTTTGGCGTGGATGTCCTGGACAGA
AGCGTGGACACGCAGGGACGGTTGCACAGCACCAGGCTGCTCAGCACCGAGTGGGGTCTC
CCCTCCATGGCTAAAACTATCGCTGGGATATCAAAAACGTGCACTTATGTTCAGGAGCAT
TCTGTGGTTGATCCTCAAGAGAAAACCTTTGAGCTCAAGTCTACAAATATTTCTTTCACA
AACATGGTGTCAGTGGACGAGAAGCTGACGTACAAACCGCATCCGCAGGATCCTGAAAAG
ACAGTGCTGACTCAGGAGGCCCTCATCAGTGTGAAGGGGGTCAGTCTTAGCAGCTACCTG
GAGGGCCTGATGGCAAAAACCATCTCTGGCAACGCCAACAAGGGTCGGGAGGCCATGGAA
TGGGTCATCAGACGATTGAACACAGAAATCGAAGAGTTGGCAGCAACAGCGCGTGGAACT
ATGCGCGTTCCCATGGCAGCAGCCGTTGCAGACAAATGATGGCGTCCTGAACCAGTGGAC
CTCTCGGACATTTCCTCACACCTCGCGTGTCAGCGGAGCCTGACCACCACAGTCTCGTCC
TCCGGCGCCTCCCCCGTCTTTGTGTGAATGTTGCTGGAGCTGTCCCCTGCGTCCACCCTC
AACGG

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)