These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2647#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 617 fasta sequence [CTGCTCTGATAGGAGGCTTTATTTCATCTGAGGAATCGACCCCGAGCAGGTCAGAGAGGAGCGTCTCCAGTCTGAGCGAGGCCATGGCGTGGACCCCAGCGACCGCACTGTCCGTCTCCCTGC-TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACCTGAACACCATCGGCGTCAGCGCGGCGGCCCGCAACGGGATCTGCAAGACCCAGAAGGGCAACGAGGTCACGTCCATCCTGAAGTGGGCCAAAGACGCAGGCTAGTCTGTGGGAATCTTGACGACCACGCGGGTGCATTACGCCACCCCCGCCGCC] [+] EMBL CA589725 [CTGCTCTGATAGGAGGCTTTATTTCATCTGAGGAATCGACCCCGAGCAGGTCAGAGAGGAGCGTCTCCAGTCTGAGCGAGGCCATGGCGTGGACCCCAGCGACCGCACTGTCCGTCTCCCTGC TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACC ] [+] EMBL CA589780 [ ATCGACCCCGAGCAGGTCAGAGAGGAGCGTCTCCAGTCTGAGCGAGGCCATGGCGTGGACCCCAGCGACCGCACTGTCCGTCTCCCTGC TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACCTGAACACCATCGGCGTCAGCGCGGCGGCCCGCAAC ] [+] EMBL CA589508 [ CGAGCAGGTCAGAGAGGAGCGTCTCCAGTCTGAGCGAGGCCATGGCGTGGACCCCAGCGACCGCACTGTCCGTCTCCCTGC TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACCTGAACACCGTCGGCGTCAGCGCGGCGGCCCGCAAC ] [+] EMBL CA589506 [ CGAGCAGGTCAGAGAGGAGCGTCTCCAGTCTGAGCGAGGCCATGGCGTGGACCCCAGCGACCGCACTGTCCGTCTCCCTGC TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACCTGAACACCATCGGCGTCAGCGCGGCGGCCCGCAACGGGAT ] [+] EMBL CA589812 [ GTCAGAGAGGAGCGTCTCCAGTCTGAGCGACGCCATGGCGTGGACCCCAGCGACCGCACTGTCCGTCTCCCTGC TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGATCTCATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACCTGAACACCATCGGCGTCAGCGCGGCGGCCCCCAACGGGATCTGCAAGACCCAGAAGGGCAACGAGGTCACGTCCATCCTGAAGTGGGCCAAAGACGCAGGCTAGTCTGTGGGAATCTTGACGACCACGCGGGTGCATTACGCCACCCCCGCCGCC] [+] EMBL CA590880 [ CAGTCTGAGCGAGGCCATGGCGTGGACCCCAGCGACCGCACTGTCCGTCTCCCTGC TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACCTGAACACCATCGGCGTCAGCGCGGCGGCCCGCAACGGGATC ] [+] EMBL CA589987 [ CAGTCTGAGCGAGGCCATGGCGTGGACCCCAGCGACCGCACTGTCCGTCTCCCTGC TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACCTGAACACCATCGGCGTCAGCGCGGCGGCCCGCAACGGGATC ] [+] EMBL CA591501 [ CTTTCTGAGCGAGGCCATGGCGTGGACCCCAGCGACCGCACTGTCCGTCTCCCTGC TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACCTGAACACCATCGGCGTCAGCGCGGCGGCCCGCAACGGGATC ] [+] EMBL CA845102 [ CACTGTCCGTCTCCCTGC TGCTTCTCTCCGGGTTCGCTCAGTCCAGAGTCGAGGAGGAGAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCTTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGGACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAACCTGAACACCATCGGCGTCAGCGCGGCGGCCCGCAACGGGATC ] [+] EMBL FR0059785 [ TGTCCGTCTCCCTGCGGGGGGGTCTCCGAGGTGGCTCAGTCCAGACCCGAGGAGTANAACCCAGAGTTCTGGAGGTCCCAGGCCCAGAAGTCTCTTCAGTCGGTCCTGGACAGGAAGCTCAACACCAACGTTTCCAGAAACATCCTGTTCCTCCTCGGAGACGGGATGGGAGTGACCACATACACGGCGGCCCGTATCCTCAGGGGCCAGCTGCAGAACCAGAGCGGGGAGGAGACGGTCATGACCATGGACACGTTCCCCAGCGTGGGGCTCGCTAAGACCTACAGCGTGTACTTCCAAATCCCAGACAGCGCCGCCACCGCCACGGCGTTTCTGTGCGGGGTGAAGACCAA ] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |