Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2697 cluster # 2697       Sequences # 13       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2697#0 length = 630 sequences # 13  

consensusID : consensus_2697#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 630
fasta sequence
                              [CTCCTTCCTCTCCAGCCACCGAGAACCTTCCAGGCTGTTTCTGTTCGGCAGACTCTGTCAAAATGTTCGGCCAGCAGGTTCTTGTGCTCAAC-CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCCTGAAGGAGATCAGCACCCCTGTGGACACGTCAGATCGCTCCATGATGCTGAAGATAGTCCATTCGGCCATTAACACCAAGATGCTGAGCCGCTGGACCGAGCTGGCCTGTGGTATTGCGCTGGACGCCGTCCGGATTGTGGAGCTGGAAGACAACGGTCGCA]

[+] EMBL BU808420             [CTCCTTCCTCTCCAGCCACCGAGAACCTTCCAGGCTGTTTCTGTTCGGCAGACTCTGTCAAAATGTTCGGCCAGCAGGTTCTTGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCT                                                                                                                                                                          ]
[+] EMBL CA845850             [           tCCTCCACCGAGAACCTTCCAGGCTGTTTCTGTTCGGCAGACTCTGTCAAAATGTTCGGCCAGCAGGTTCTTGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCCCTGAGGAAATCAGCACCCCTGTGGACACCTCAGATCCC                                                                                                                            ]
[+] EMBL FR0062597            [                    GAGAACCTTCCAGGCTGNTTCTGTTCGGCAGACTCTGTCAAAATGTTCGGCCAGCAGGTTCTTGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGGCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGGTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCA                                                                                                                                                                                                                                   ]
[+] EMBL CA590246             [                                 GCTGTTTCTGTTCGGCAGACTCTGTCAAAATGTTCGGCCAGCAGGTTCTTGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCCTGAAGGAGATC                                                                                                                                                       ]
[+] EMBL BU806795             [                                 GCTGTTTCTGTTCGGCAGACTCTGTCAAAATGTTCGGCCAGCAGGTTCTTGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCCTGAAGGAG                                                                                                                                                          ]
[+] EMBL CA590901             [                                 GCTGTTTCTGTTCGGCAGACTCTGTCAAAATGTTCGGCCAGCAGGTTCTTGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCCTGAAGG                                                                                                                                                            ]
[+] EMBL BU807393             [                                 GCTGTTTCTGTTCGGCAGACTCTGTCAAAATGTTCGGCCAGCAGGTTCTTGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGGAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCC                                                                                                                                                                  ]
[+] EMBL FR0059622            [                                                      CTGTCAAAATGTTCGGCCAGCAGGTTCTTGTGCTCAAC CAGGGCATTAAGAGAGAGTCTGNACGTAANGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGCATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGGCCAGCATCCTGCCGCCA                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL FR0061406            [                                                       TGTCAAAATGTTCGGCCAGCAGGTTCTGGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGA                                                                                                                                                                       ]
[+] EMBL CA590639             [                                                                         GCAGGTTCTTGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGCGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCCTGAAGGAGATCAGCACCCCTGTGGACAC                                                                                                                                      ]
[+] EMBL FR0060643            [                                                                         GCAGGTTCTTGTGCTCAGCGCAGAACATTAAGAGAGAGTCTGGACGTAAGGCCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGGCCAGCATCCTTGCGCCA                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BU807498             [                                                                              TTCTTGTGCTCAAC CAGAACATTAAGAGAGAGTCTGGACGTAAGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCCTCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCAATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGATTGATATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCCTCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCCTGAAGGAGATCAGCACCCCTGTGGACACGTCAGATCGCTCCATGATGCTGAAGA                                                                                                            ]
[+] EMBL FR0056241            [                                                                                                                                                                                                                                                                                                                                                                                                                                 ACAGTCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCCTGAAGGAGATCAGCACCCCTGTGGACACGTCAGATCGCTCCATGATGCTGAAGATAGTCCATTCGGCCATTAACACCAAGATGCTGAGCCGCTGGACCGAGCTGGCCTGTGGTATTGCGCTGGACGCCGTCCGGATTGTGGAGCTGGAAGACAACGGTCGCA]


>consensus_2697#0 CTCCTTCCTCTCCAGCCACCGAGAACCTTCCAGGCTGTTTCTGTTCGGCAGACTCTGTCA AAATGTTCGGCCAGCAGGTTCTTGTGCTCAACCAGAACATTAAGAGAGAGTCTGGACGTA AGGTCCAAACTGGCAACATCAATGCTGCAAAGACCATTGCAGATGCGATCCGGACCTGCC TCGGCCCTCGGGCCATGATGAAGATGTTGCTGGATCCAATGGGAGGTATTGTGATGACCA ATGATGGGAATGCCATCCTAAGAGAGATCCAGGTCCAGCATCCTGCCGCCAAATCCATGA TTGAGATCAGTCGCACTCAGGATGAGGAAGTCGGAGATGGAACCACTTCTGTTATTATCC TCGCTGGAGAGTTTCTGTCTGTAGCTGAGGAGTTCCTGGAGCAACAGATTCATCCAACAG TCGTCACTGGCGCCTACCATCGGGCTCTAGACGACATGCTGGAGGTCCTGAAGGAGATCA GCACCCCTGTGGACACGTCAGATCGCTCCATGATGCTGAAGATAGTCCATTCGGCCATTA ACACCAAGATGCTGAGCCGCTGGACCGAGCTGGCCTGTGGTATTGCGCTGGACGCCGTCC GGATTGTGGAGCTGGAAGACAACGGTCGCA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)