These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2724#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 791 fasta sequence [CCGCTGGTCTGACCAACACTGAATGAAAACGCACTGATTTCGACTATAAAATGATGAAATTTCTACCGAAGTTGCTGC-TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTGCT-GGGCTTCACCAACAAGGGCTCGGAGGACTTCGTTGTGGAGTCTCTGGATGCTTCTTTTCGTTACCCTCAGGATTTCCAGTTCTACATCCAAAACTTCACTGCTCTTCAGCTCGGCACCATAGTTCCTCCTGCGCGTCAGGCCACCTTTGAGTACTCGTTTATCCCTGCAGAGCCGAT-GGGGGGGCGGCCGTTCGGACTCGTTATCAACCTCAACTACAAGGACAACAGTGGAAACATTTTCCAGGATGCAGTTTTCAACCAGACTGTTACCATCACAGAGAGGGAAGACGGCTTGGATGGAGAGACCATCTTCATGTACGTCTTCCTGTCGGGTCTCGGCCTGCTCGTCATCATCGGTCTTCATCCGCTGCTGGAGTCCAAAAAGAGACGGCGCCCGGCTCCAAAG] [+] EMBL BU807791 [tCGCTGGTCTGACCAACACTGAATGAAAACGCACTGATTTCGACTATAAAATGATGAAATTTCTACCGAAGTTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACATAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTGCT GGGCTTCACCAACAAGGGCTCGGAGGACTTCGTTGTGGAGTCTCTGGATGCTTCTTTTCGTTACCCTCAGGATTTCCAGTTCTACATCCAAAACTTCACTGCTCTTCAGCTCGGCACCATAGTTCCTCCTGCGCGTCAGGCCACCTTTGAGTACTCGTTTATCCCTGCAGAGCCGAT GGGGGGGCGGCCGTTCGGACTCGTTATCAACCTCAACTACAAGGACAACAGTGGAAACATTTTCCAGGATGCAGTTTTCAACCAGACTGTTACCATCACAGAGAGG ] [+] EMBL BU806787 [ CGCTGGTCTGACCAACACTGAATGAAAACGCACTGATTTCGACTATAAAATGATGAAATTTCTACCGAAGTTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGTTAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTGCT GGGCTTCACCAACAAGGGCTCGGAGGACTTCGTTGTGGAGTCTCTGGATGCTTCTTTTCGTTACCCTCAGGATTTCCAGTTCTACATCCAAAACTTCACTGCTTTTCAGCTCGGCACCATAGTTCCTCCTGCGCGTCAGGCCACCTTTGAGTACTCGTTTATCCCTGCAGAGCCCATGGGGGGGGCGGCCGTTCGGACTCGTTATCAACCTCAACT TACAGACCACAGTGGAAACCTTTTTCAGGATGCAGTTTTC ] [+] EMBL CA590167 [ CGCTGGTCTGACCAACACTGAATGAAAACGCACTGATTTCGACTATAAAATGATGAAATTTCTACCGAAGTTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTGCT GGGTTTCACCAACAAGGGCTCGGAGGACTTCGTTGTGGAGTCTCTGGATGCTTCTTTTCGTTACCCTCAGGATTTCCAGTTCTACATCCAAAACTTCACTGCTCTTCAGCTCGGCACCATAGTTCCTCCTGCGCGTCAGGCCACCTTTGAGTACTCGTTTATCCCTGCAGAGCCGAT GGGGGGGCGGCCGTTCGGACTCGTTATCAACCTCAACTACAAGGACAACAGTGGAAACATTTTCCAGGAT ] [+] EMBL CA591678 [ctanaaGGCTGACCAACACTGAATGAAAACGCACTGATTTCCTCTATAAAATGATGAAATTTCTACCGAAGTTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTTAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTGCT GGGCTTCACCAACAAGGGCTCGGAGGACTTCGTTGTGGAGTCTCTGGATGCTTCTTTTCGTTACCCTCAGGATTTCCAGTTCTACATCCAAAACTTCACTGCTCTTCAGCTCGGCACCATAGTTCCTCCTGCGCGTCAGGCCACCTTTGAGTACTCGTTTATCCCTGCAGAGCCGAT GGGGGGGCGGCCGTTCGGACTCGTTATCAACCTCAACTACAAGGACAACAGTGGAAACATTTTCCAGGATGCAGTTTTCAACCAGACTGTTACCATCACAGAGAGGGAAGACGGCTTGGATGGAGAGACCATCTTCATGTACGTCTTCCTGTCGGGTCTCGGCCTGCTCGTCATCATCGGTCTTCATCCGCTGCTGGAGTCCAAAAAGAGACGGCGCCCGGCTCCAAAG] [+] EMBL CA332741 [ CTGACCAACACTGAATGAAAACGCACTGATTTCGACTATAAAATGATGAAATTTCTACCGAAGTTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGTAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTGCT GGGCTTCACCAACAAGGGCTCGGAGGACTTCGTTGTGGAGTCTCTGGATGCTTCTTTTCGTTACCCTCAGGATTTCCAGTTCTACATCCAAAACTTCACTGCTCTTCAGCTCGGCACCATAGTTCCTCCTGCGCGTCAGGCCACCTTTGAGTACTCGTTTATCCCTGCAGAGCCGAT GGGGGGGCCGGCGTTCGGACTCGTTATCAAC ] [+] EMBL FR0064068 [ ACACTGAATGAAAACGCACTGATTTCGACTATAAAATGATGAAATTTCTACCGAAGTTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGGTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAAGTCCTGCT GGGCTTCACCAACAAGGGCTTCGAGGACTTCGTTGGGGAGTCTCTGGATGCTTCTTTTtcg ] [+] EMBL BU807507 [ TGAATGAAAACGCACTGATTTCGACTATAAAATGATGAAATTTCTACCGAAGTTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGAT TATTTTCAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTGCT GGGCTTCACCAACAAGGGCTCGGAGGACTTCGTTGTGGAGTCTCTGGATGCTTCTTTTCGTTACCCTCAGGATTTCCGTTTCTACATCCAAAACTTCACTGCTCTTCAGCACGGCACCATAGTTCCTCCTGCGCGTCAGGCCACCTTTGAGTACTCGTTTATCCCTGCAGAGCCGAT GGGGGGGCGGCCGTTCGGACTCGTT ] [+] EMBL CA846119 [ CGCACTGATTTCGACTATAAAATGATGAAATTTCTACCGAAGTTGCTTC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCCGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTGCT GGGCTTCACCAACAAGGGCTCGGAGGACTTCGTTGTGGAGTCTCTGGATGCTTCTTTTCGTTACCCTCAGGATTTCCAGTTCTACATCCAAAACTTCACTGCTCTTCAGCTCGGCAC ] [+] EMBL FR0060235 [ TGATGAAATTTCTACCGAAGGTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGCGACGGCAGAGGATGAAAATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAG ] [+] EMBL FR0062014 [ GATGAAATTTCTACCGAAGTTGCGGG TGCT GTTTTGGTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCTCGAGCTGTGGACGAAGACATAGTAGAAGACGTGACTGGAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGGTGGCGAAGTGAAAGCATCGCCCAACGCTTGCACCACGATTCTGTTTGTCAAGGGAGAAGATTTCCCCGCCAACAACATCGGCAAGTTCCTGCT GGGTTTCACCAACAAGGGCTCGGAGGACTTCGTTGGGGGGCC ] [+] EMBL FR0061228 [ GATGAAATTTCTACCGAAGGTGCGGCGTGCTGGTTTTGTTAGCGTTCCCAGCGCCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCTTCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAAAATTCCCCGCCAACAACATCGg ] [+] EMBL FR0059111 [ GAAGGTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGGCAAGTTCCTGCTGGGGTTTCACCAACAA ] [+] EMBL BU807504 [ AAGTTGCTGC TGCTCGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATTAGGTATAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGTTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGTCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTGCT GGGCTTCACCAACAAGGGCTCGGAGGACTTCGTTGTGGAGTCTCTGGATGCTTCTTTTCGTTACCCTCAGGATTTCCAGTTCTACATCCAAAACTTCACTGCTCTTCAGCTCGGCACCATAGTTCCTCCTGCGCGTCAGGCCACCTTTGAGTACTCGTTTATCCCTGCAGAGCCGAT GGGGGGGCGGCCGTTCGGACTCGTTATCAACCTCCACTACAAG ] [+] EMBL FR0061815 [ AGTTGCTGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGGTGGAGAAGTGAAAGCATCGCCCAACGCTGACACCACGATTCTGTTTGGCAAGGGAGAAGACTTCCCCGCCAACAACATCGTCAAGTTCCTG ] [+] EMBL FR0060229 [ TGC TGCTGGTTTTGTTAGCGTTCCCAGCGTCCTTACTCATTAAAGGTCCAGAGGTGAGTGCCCAGGACCTGACTGAGGATGAGGAGGCCGAGGCTGTGGACGAAGACATAGTAGAAGACGTGACGGCAGAGGATGAAGATGATGAGGCAGAAGTGGAGGATGATGAAAACACAGAGCTGACAGAAGAAAAAGAAGATGAAGAAGAAGAAGCTCTGGGTGGAAAAGTGAAAGCATCGCCCAACG ] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |