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Takifugu rubripes
cluster # 2775 cluster # 2775       Sequences # 19       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2775#0 length = 523 sequences # 18  
consensus_2775#1 length = 362 sequences # 1  

consensusID : consensus_2775#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 523
fasta sequence
                              [AATTCGGCACGAG---AGGCGAAGAAGGAAGTGGTCCCTGTCAAGACTGAAGCCAAGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT-GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAATATTTGTATTGACTAAAAAGAAAAGAAA]

[-] EMBL CA588807             [AATTCGGCACGAGCGAAGGCGAAGAAGGAAGTGGTCCCTGTCAAGACTGAAGCCAAGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTC                                                                                                             ]
[+] EMBL CA340947             [      GCACGAG   AGGCGAAGAAGGAAGTGGTTTCTGCCAAGACTGAAGCCAAGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAAT                           ]
[+] EMBL CA330189             [                        AAGGAAGTGGTCCCTGTCAAGACTGAAGCCAAGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAATATTTGTATTGA                ]
[+] EMBL CA330401             [                           GAAGTGGTCCCTGTCAAGACTGAAGCCAAGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAATAATATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGG                                               ]
[+] EMBL FR0058008            [                             AGTGGTCCCTGTCAAGACTGAAGCCAAGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGATGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACT                                                                                                                                                  ]
[+] EMBL FR0057277            [                               TGGTCCCTGTCAAGACTGAAGCCAAGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTAGCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGATGTCAAGGCAGACATACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGAGGTTGCCAAAGTCAACACTCTAATCAGGCCTGACGGTGAAAACATAGGGTATGGTTCGCTGGCACCAGATTACGAT GCATTGGGT                                                                               ]
[+] EMBL CA341125             [                                   CCCTGTCAAGACTGAAGCCAAGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAATATTTGTATT                  ]
[+] EMBL FR0056892            [                                                     CAAGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCANACAAGATTGGCATCATCTAAACTGGCAGAA                                          ]
[+] EMBL FR0055209            [                                                       AGTCAAAGGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCTTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAATATTTGTATTGACTAAACCGCAAAGAAA]
[+] EMBL FR0056685            [                                                              GGCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAGACTGGCAGAAAGGG                                      ]
[+] EMBL FR0055819            [                                                              GGCTCTGAAGGCCAAAAGGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAGACACCAGATCAAGCACGCTGTCAAGAAGCTGTAGGACATTGATGTTGCCAAAGTCAGCACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGGAACAGATTACGATGGCATTGGAT                                                                               ]
[+] EMBL FR0057015            [                                                                       GGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGAT                                                                 ]
[+] EMBL CA340965             [                                                                        GCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGATGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAATAT                         ]
[+] EMBL CA844854             [                                                                                              GTGTACACAGCCAGGGGAGGAAGAAGATCAGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGTCAATAATTCACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGCATGTTCGTCTGGTACCAGATTACGAT GCATTGGATGTTGCCAAC                                                                      ]
[+] EMBL CA330659             [                                                                                                                                     CAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAATATTTGTATT                  ]
[+] EMBL CA330541             [                                                                                                                                                                                                                  AAGTTGGATCACTATGCTATCATCAAGTTCCCCCTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTGGATGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAATATTTGTATT                  ]
[+] EMBL FR0056826            [                                                                                                                                                                                                                                                                                         TAACACACTTGTGTTCATCGTGGACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAATATTTGTATTGACTAAAAAAA       ]
[+] EMBL CA330365             [                                                                                                                                                                                                                                                                                                                                                          AGCTGTATGACATTGATGTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTGGCACCAGATTACGAT GCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGAAAGGGCTTGAATAAATATTTGTATTG                 ]


>consensus_2775#0 AATTCGGCACGAGAGGCGAAGAAGGAAGTGGTCCCTGTCAAGACTGAAGCCAAGTCAAAG GCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATC AGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTAC CCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCC CTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTG GACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGAT GTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTG GCACCAGATTACGATGCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGA AAGGGCTTGAATAAATATTTGTATTGACTAAAAAGAAAAGAAA



consensusID : consensus_2775#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 362
fasta sequence
                              [NCAAGGGCGCACACAGCCAGAGGAGGAAGAAGANCAGGACTTCTCCCCCCCAAAAGGGCNCCCAAACTCTGCGNCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCCCCCCGGAGGAACAAGTCGGACCACTATGCTATCAACAAGGCCCCCCAGACGACAGAGCCCGCCATGAAGAAGATAGAGGATAATAACCCACTTGAGATCACCGTGGATGTCAAGGCAAACAAACACCAGATCAAGCACGCTGACAAGAAGCTGTATGACATTGATGTTGCCAAAGCCAACACTCCCAACAGACCAGACGGGGAAAAGAAGGCGCAAGGTCCTCTGGCCCCCCACAACGAAGCCCCGGACGAA]

[+] EMBL CA846413             [NCAAGGGCGCACACAGCCAGAGGAGGAAGAAGANCAGGACTTCTCCCCCCCAAAAGGGCNCCCAAACTCTGCGNCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCCCCCCGGAGGAACAAGTCGGACCACTATGCTATCAACAAGGCCCCCCAGACGACAGAGCCCGCCATGAAGAAGATAGAGGATAATAACCCACTTGAGATCACCGTGGATGTCAAGGCAAACAAACACCAGATCAAGCACGCTGACAAGAAGCTGTATGACATTGATGTTGCCAAAGCCAACACTCCCAACAGACCAGACGGGGAAAAGAAGGCGCAAGGTCCTCTGGCCCCCCACAACGAAGCCCCGGACGAA]


>consensus_2775#1 NCAAGGGCGCACACAGCCAGAGGAGGAAGAAGANCAGGACTTCTCCCCCCCAAAAGGGCN CCCAAACTCTGCGNCTCCGCAGGCAGCCCAAGTACCCTCGCAAAAGTGCCCCCCGGAGGA ACAAGTCGGACCACTATGCTATCAACAAGGCCCCCCAGACGACAGAGCCCGCCATGAAGA AGATAGAGGATAATAACCCACTTGAGATCACCGTGGATGTCAAGGCAAACAAACACCAGA TCAAGCACGCTGACAAGAAGCTGTATGACATTGATGTTGCCAAAGCCAACACTCCCAACA GACCAGACGGGGAAAAGAAGGCGCAAGGTCCTCTGGCCCCCCACAACGAAGCCCCGGACG AA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2775#0      AATTCGGCACGAGAGGCGAAGAAGGAAGTGGTCCCTGTCAAGACTGAAGCCAAGTCAAAG 60
consensus_2775#1      ------------------------------------------------------------
                                                                                  

consensus_2775#0      GCTCTGAAGGCCAAAAAGGCCGTGCTCAAGGGTGTACACAGCCAGAGGAGGAAGAAGATC 120
consensus_2775#1      -------------------------NCAAGGGCGCACACAGCCAGAGGAGGAAGAAGANC 35
                                                ****** * *********************** *

consensus_2775#0      AGGACTTCTCCAACCTTCCGTCGCCCCAAAACTCTGCGTCTCCGCAGGCAGCCCAAGTAC 180
consensus_2775#1      AGGACTTCTCCCCCCCAAAAGGGCNCCCAAACTCTGCGNCTCCGCAGGCAGCCCAAGTAC 95
                      ***********  **       ** ** ********** *********************

consensus_2775#0      CCTCGCAAAAGTGCTCCCCGTAGGAACAAGTTGGATCACTATGCTATCATCAAGTTCCCC 240
consensus_2775#1      CCTCGCAAAAGTGCCCCCCGGAGGAACAAGTCGGACCACTATGCTATCAACAAGGCCCCC 155
                      ************** ***** ********** *** ************* ****  ****

consensus_2775#0      CTGACTACAGAGTCTGCCATGAAGAAGATAGAGGATAATAACACACTTGTGTTCATCGTG 300
consensus_2775#1      CAGACGACAGAGCCCGCCATGAAGAAGATAGAGGATAATAACCCACTTGAGATCACCGTG 215
                      * *** ****** * *************************** ****** * *** ****

consensus_2775#0      GACGTCAAGGCAAACAAACACCAGATCAAGCACGCTGTCAAGAAGCTGTATGACATTGAT 360
consensus_2775#1      GATGTCAAGGCAAACAAACACCAGATCAAGCACGCTGACAAGAAGCTGTATGACATTGAT 275
                      ** ********************************** **********************

consensus_2775#0      GTTGCCAAAGTCAACACTCTAATCAGACCTGACGGTGAAAAGAAGGCGTATGTTCGTCTG 420
consensus_2775#1      GTTGCCAAAGCCAACACTCCCAACAGACCAGACGGGGAAAAGAAGGCGCAAGGTCCTCTG 335
                      ********** ********  * ****** ***** ************ * * ** ****

consensus_2775#0      GCACCAGATTACGATGCATTGGATGTTGCAAACAAGATTGGCATCATCTAAACTGGCAGA 480
consensus_2775#1      GCCCCCCACAACGAAGCCCCGGACGAA--------------------------------- 362
                      ** **  *  **** **   *** *                                   

consensus_2775#0      AAGGGCTTGAATAAATATTTGTATTGACTAAAAAGAAAAGAAA 523
consensus_2775#1      -------------------------------------------
                                                                 




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)