These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2848#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 528 fasta sequence [CTAAGGTGCTTGGTTCTTCTGCCGAAGCTAAGG-CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC-CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA-GGAAGAGTCTGA--AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAATCATAAAAAATAGAAAAAAAAAAAAGAGGGGGGGCCCGGTACCCAGTTTTTGTCCCC] [+] EMBL CA846877 [CTAAGGTGCTTGCTTCTTCTGCCGAAGCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGATTTTCTCGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAATCATAAAAAA ] [+] EMBL CA847200 [ AGGTGCTTGGTTCTTCTGCCGAAGCTAAGGCCCCCTTATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAA ] [+] EMBL CA330264 [ GGTGCTTGGTTCTTCTGCCGAAGCTAAGG TTTCCCCCCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTTTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAATCATAAAAAAT ] [+] EMBL CA330039 [ GGTGCTTGGTTCTTCTGCCGAAGCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAATCATAAAAA ] [+] EMBL CA847092 [ aGAGCTTGGTTCTTCTGCCGAAGCTAGGC CCCC CTCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTANAGTGGATGTTTTTGTAAAAACATTAAAA ] [+] EMBL FR0056944 [ TTGGTTCTTCTGCCGAAGCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAAGGGAAGAGTCTGANNAGAGTCCn ] [+] EMBL FR0055993 [ TTGGTTCTTCTGCCGAAGCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGCGATGCTCCAGCCAAGGCAGAGGAGAAGAGAGAGGAGAACAA GGAAGAGTCTGA AGAGTCCGATGATGAC ] [+] EMBL FR0056137 [ GGTTCTTCTGCCGAAGCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAANATCATAAA ] [+] EMBL CA845571 [ GGTTCTTCTGCCGAAGCTAAGG CCCCGAATTCGTCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGTTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAA ] [+] EMBL FR0057105 [ GTTCTTCTGCCGAAGCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGC ] [+] EMBL FR0055259 [ CCGAAGCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACAT ] [+] EMBL FR0057154 [ CGAAGCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAATCCGATGATGACATGGGCTTTGGTCTCTTTGATTAA ] [+] EMBL FR0055986 [ CGAAGCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACA ] [+] EMBL FR0057297 [ GCTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGAT ] [+] EMBL FR0055386 [ CTAAGG CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGATGAGAAGAAAGAGGAGAAGAA GGGAGAGTCTGA ACAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTCAAAACATTAAAATCATAGAA ] [+] EMBL FR0056102 [ G CCCCGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAATGCAGAGGAGAAGAAAGAGGAGAAGAC AGGAGAGTCTGA AGAGTCCGA ] [+] EMBL FR0057291 [ CGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGGGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGGCTCTTTGATTAAAGTGGAT ] [+] EMBL FR0057201 [ CGAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAATCATAAAAAATTGAAAAAAAAAAAAAA ] [+] EMBL FR0055785 [ AATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA AGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTGAAAACATTAAGATCATAGGA ] [+] EMBL FR0056282 [ CCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCAC CGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTTGTAAAACATTAAAATCATAAA ] [+] EMBL FR0056600 [ GCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAA GGAAGAGTCTGA AGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAATCATAAAAAAAAAAAAAAAAACCCCGAGGGGGGGCCCGGTACCCAGTTTTTGTCCCC] consensusID : consensus_2848#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 403 fasta sequence [TCTTCTGCCCGATGTTAAGGCCCGAAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGATAAGAAAGAGGAGAAGAAGGAAGAGTCTGAAGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTCAAAACATTAAAATCATAAAAAATTGCAAACAATAATGAAAA] [+] EMBL FR0055834 [TCTTCTGCCCGATGTTAAGGCCCGAAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGATAAGAAAGAGGAGAAGAAGGAAGAGTCTGAAGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTCAAAACATTAAAATCATAAAAAATTGCAAACAATAATGAAAA] [+] EMBL FR0056767 [ CATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGATGACAAGCTGATCGCCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTC ] consensusID : consensus_2848#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 389 fasta sequence [TCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCACCGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGAGGCGACCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGGTTAGTTTGGTGACCGGATATTATGGATCACATAGTCCTAACTGGACATCCCCCTGTATGCTTGTCAAT] [+] EMBL FR0056788 [TCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCACCGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGGTTAGTTTGGTGACCGGATATTATGGATCACATAGTCCTAACTGGACATCCCCCTGTATGCTTGTCAAT] [+] EMBL FR0056719 [ TAGCACCCCCATTTTTAGGCATCCATCGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCACCGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGCCGCTGGTGGAGGCGACCCGGCCGGACCTCCTGCTGCCGGTGCTCCTGCTGCTGGT ] consensusID : consensus_2848#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 345 fasta sequence [GTCACCGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGTCTGAAGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAATCATAAAAAATTGCCAAAGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCCGGGGGGGCCCCGGAACCAAATTTTTGGCCC] [+] EMBL FR0056110 [GTCACCGTGGAGCCTTTCTGGCCAAGTCTGTTTGCTAAGGCTCTGTCCAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGTCTGAAGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAATCATAAAAAATTGCCAAAGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCCGGGGGGGCCCCGGAACCAAATTTTTGGCCC] [+] EMBL CA846629 [ AGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGCTCCAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGTCTGAAGAGTCCGATGATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTAAAATCATAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2848#0 CTAAGGTGCTTGGTTCTTCTGCCGAAGCTAAGGCCCCGAATCCGGCGACTAGCACCCCCA 60 consensus_2848#3 ------------------------------------------------------------ consensus_2848#1 ------------------------------------------------------------ consensus_2848#2 ------------------------------------------------------------ consensus_2848#0 TTTTTAGGCATCCAACGCGATAAACGTGAGATACATCATCTGAAATGGCCTCCGTGTCCG 120 consensus_2848#3 ------------------------------------------------------------ consensus_2848#1 ----------------------------------------TCTTCTGCCCGATGTTAAGG 20 consensus_2848#2 ------------------------------------------------------------ consensus_2848#0 AGCTCGCCTGTATTTACTCCGCTCTGATCCTCCACGACGATGAAGTCACCGTCACCGAGG 180 consensus_2848#3 ------------------------------------------------------------ consensus_2848#1 CCCGAAATCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATA 80 consensus_2848#2 -------TCCGGCGACTAGCACCCCCATTTTTAGGCATCCAACGCGATAAACGTGAGATA 53 consensus_2848#0 ACAAGCTGATCGCCCTGATCAAGGCTGCCGGAGTCACCGTGGAGCCT-TTCTGGCCAAGT 239 consensus_2848#3 --------------------------------GTCACCGTGGAGCCT-TTCTGGCCAAGT 27 consensus_2848#1 CATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCC 140 consensus_2848#2 CATCATCTGAAATGGCCTCCGTGTCCGAGCTCGCCTGTATTTACTCCGCTCTGATCCTCC 113 * * * * * **** * consensus_2848#0 CTGTTTGCTAAGGCTCTGTC--CAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAG 297 consensus_2848#3 CTGTTTGCTAAGGCTCTGTC--CAGCATCGACATCGGCAGCCTGATCTGCAACGTTGGAG 85 consensus_2848#1 ACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCTGCAACGTTGGAG 200 consensus_2848#2 ACGACGATGAAGTCACCGTCACCGAGGACAAGCTGATCGCCCTGATCAAGGCTGCCGGAG 173 * *** * * *** * * * * * ******* * **** consensus_2848#0 CTG--GTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGC 355 consensus_2848#3 CTG--GTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGC 143 consensus_2848#1 CTG--GTGGCGGCGCCCCGGCCGGAGCTCCTGCTGCCGGAGCTCCTGCTGCTGGTGATGC 258 consensus_2848#2 TCACCGTGGAGCCTTTCTGGCCAAGTCTGTT--TGCTAAGGCTCTGTCCAGCATCGACAT 231 **** * * * **** ** * *** **** * ** consensus_2848#0 TC-CAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGTCTGAAGAGTCCGATG 414 consensus_2848#3 TC-CAGCCAAGGCAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGTCTGAAGAGTCCGATG 202 consensus_2848#1 TC-CAGCCAAGGCAGAGGATAAGAAAGAGGAGAAGAAGGAAGAGTCTGAAGAGTCCGATG 317 consensus_2848#2 CGGCAGCCTGATCTGCAACGTTGGAGCTGGTGGAGGCG-ACCCGGCCGGAGCTCCTGCTG 290 ***** * * * * ** * ** * * * * * ** * * ** consensus_2848#0 ATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTA-AAATC 473 consensus_2848#3 ATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTAAAAACATTA-AAATC 261 consensus_2848#1 ATGACATGGGCTTTGGTCTCTTTGATTAAAGTGGATGTTTTTGTCAAAACATTA-AAATC 376 consensus_2848#2 CCGGAGCTCCTGCTGCTGGTGATGCTCCAGGTTAGT-TTGGTGACCGGATATTATGGATC 349 * ** * ** * * ** * ** ** * **** *** consensus_2848#0 ATAAAA----AAT-------------AGAAAAAAAAAAAAGA-----------------G 499 consensus_2848#3 ATAAAA----AATTGCCAAAGCCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCCGG 317 consensus_2848#1 ATAAAA----AATTGC----------AAACAATAATGAAAA------------------- 403 consensus_2848#2 ACATAGTCCTAACTGGACATCCCCCTGTATGCTTGTCAAT-------------------- 389 * * * ** * ** consensus_2848#0 GGGGGGCCCGGTACCCAGTTTTTGTCCCC 528 consensus_2848#3 GGGGGCCCCGGAACCAAATTTTTGGCCC- 345 consensus_2848#1 ----------------------------- consensus_2848#2 ----------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |