These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2858#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 940 fasta sequence [CTCTCAGCTGCCCTGATTCCTGCCCATCATGAGGGTCTTTGCGGTTTTCTTGCTGCTCGCCGTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA-GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG--ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACAAGATGGAGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAATGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTG---------AAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGCCCGGGACCCAAGTTTTGGCCC] [+] EMBL CA589836 [CTCTCAGCTGCCCTGATTCCTGCCCATCATGAGGGTCTTTGCGGTTTTCTTGCTGCTCGCCGTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAa ] [+] EMBL CA847047 [ TCATGAGGGTCTTTGCGGTTTTCTTGCTGCTCGCCTTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACCAGATGGAGGAAATCCGAGGC ] [+] EMBL CA847177 [ TCATGAGGGTCTTTGCGGTTTTCTTGCTGCTCGCCGTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTANACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCCAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTT ] [+] EMBL CA844982 [ TCATGAGGGTCTTTGCGGTTTTCTTGCTCCCCGCCGTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACATATTTT TTTTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAG ] [+] EMBL CA845151 [ ATGAGGGTCTTTGCGGTTTTCTTGCTGCTCGCCGTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGNTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTG ] [+] EMBL FR0056885 [ GCGGTTTTCTTGCTGCTCGCCGTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCANACTGAAGAAGCGCCTCAGCANGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAAGGGCCAGT ] [+] EMBL FR0056790 [ CGGTTTTCTTGCTGCTCGCCGTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGT ] [+] EMBL CA845432 [ CGGTTTTCTTGCTGCCCGCCGAAGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGTTGTACTCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCCAAAGGCATGTTTCTGACTAC ] [+] EMBL FR0056840 [ GCTCGCCGTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGT ] [+] EMBL FR0056644 [ TCGCCGTCGTCTCAGGCTGCGATGGTAGAACTATTCCCGACGAGTACAGCCGGTGGGACCTGATGGTGGACCATTTCACCAGCTATTTAACAGATCTGAACCGGAAGGCGGATGAATGTGGTGAGA ] [+] EMBL FR0056899 [ CGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGATGGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAA GTGGTGAAAGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCA ] [+] EMBL CA844994 [ ACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATG ACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACAAGATGGAGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAATGTGGACTG ] [-] EMBL CA331844 [ AAGCTTTTTTCTAAACTCACTCAGCACATGAGGGAGGCCAAAGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTTTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTTGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATTTGCGCTCCGCCCTGGAGGACAAGATGGAGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTTTAAATGTGGACTGTTCATCCATCTTTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTG AAAAAAA ] [+] EMBL CA847178 [ CTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACAAGATGGAGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAATGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATAAAGG ] [+] EMBL FR0056813 [ AAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACAAGATGGGGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAATGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACC ] [+] EMBL FR0056782 [ TGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACAAGATGGAGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAACGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTG AAAAAAAAAAAAAAAA ] [+] EMBL BU805710 [ AGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACAAGATGGAGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAATGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATA ] [+] EMBL FR0056996 [ CAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACAAGATGGAGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAATGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTG AAAAAAAAAACAAAAAAAAACCCCGGGGGGGGCCCGGGACCCAAGTTTTGG ] [+] EMBL FR0057000 [ ATGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGCCCGGTACCCAATTTTTGGCCC] [+] EMBL CA847036 [ ACATATGCAGGAAGTCTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTG AAA ] consensusID : consensus_2858#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 761 fasta sequence [ACAAACATAACCAGTTTAACTGACTGGTCAGTGCGTTAGACTGATGGATGTGGCCCTAATCTCATCGTGGTTCCACCAGCACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATGACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCC-CTGGAGGACAAGATGGAGG-AAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAACGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTGAAGGTGTGAGCA] [+] EMBL CA844973 [ACAAACATAACCAGTTTAACTGACTGGTCAGTGCGTTAGACTGATGGATGTGGCCCTAATCTCATCGTGGTTCCACCAGCACCTTGATCCAGGACAGCATGTCTGAGCTGACCATGTACAGAGATGACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGCTGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAGTGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAACGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATG ] [+] EMBL CA847016 [ AGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCC CTGGAGGACAAGATGGAGG AAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAACGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATA ] [+] EMBL CA847054 [ CTACACCCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCC CTGGAGGACAAGATGGAGG AAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAACGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTT ] [+] EMBL FR0056791 [ CCGCAAACTGAAGAAGCGCCTCAGCAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCGCACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCC CTGGAGGACAAGATGGAGG AAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAACGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAAGAAGTGTCA ] [+] EMBL FR0056689 [ CAGACAACATGGGGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTCCAGGACAGCGCCCAGGCCAAGATCACCACCCTGAGCCAGCTGCTCCAGTCACAGGGGGCGAGCATGAGGGAGGGCTTTGAGAAGACCACCGTGGGTCTGCGCTCCGCCGCTGGGGGACACGGTGGAGGCAGATCCGCTGCTGGTTCCAGCCCT ] [+] EMBL FR0056692 [ GTCAGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCC CTGGAGGACAAGATGGAGG AAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAACGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAGTA ] [+] EMBL CA847062 [ AGTCAGGTACAAGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAGCATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCC CTGGAGGACAAGATGGAGG AAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTAAACGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAGGAAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTGAAGGTGTGAGCA] [+] EMBL CA847007 [ ATGCATGTAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTGA ] consensusID : consensus_2858#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 53 fasta sequence [TGCATCTCAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTGA] [+] EMBL CA847104 [TGCATCTCAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2858#0 CTCTCAGCTGCCCTGATTCCTGCCCATCATGAGGGTCTTTGCGGTTTTCTTGCTGCTCGC 60 consensus_2858#1 ------------------------------------------------------------ consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 CGTCGTCTCAGGCTGCGATGGCAGAACTATTCCCGAGGAGTACAGCCGGTGGGAGCTGAT 120 consensus_2858#1 ------------------------------------------------------------ consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 GGTGGACCAGTTCACCAACTATTTAACAGATCTGAACCTGAAGGCGGGTGAAGTGGTGAA 180 consensus_2858#1 -----ACAAA--CATAACCAGTTTAACTGA-CTGGTC----AGTGCGTTAGACTGATGGA 48 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 AGACATCAAGAGCTCCCAGATCAGCAGAGAACTGGACACCTTGATCCAGGACAGCATGTC 240 consensus_2858#1 TGTGGCCCTAATCTC----ATCGTGGTTCCACCAG-CACCTTGATCCAGGACAGCATGTC 103 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 TGAGCTGACCATGTACAGAGATGACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGC 300 consensus_2858#1 TGAGCTGACCATGTACAGAGATGACCTGCAGACCAAGCTGACCCCCTACACCCAGGATGC 163 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 TGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAG 360 consensus_2858#1 TGCCGACCGTCTGGGCAGAGACGTGCAGAAGCTGTCTGCTAAACTCACTCAGCACATGAG 223 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 TGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAA 420 consensus_2858#1 TGAGGCCAAGGAGCAGATGGAGAAGTACAGTAACGAGCTGCAGATCATGATGGAGCAGAA 283 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 CGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAG 480 consensus_2858#1 CGCAGATGACGTCAGGGCTCGGGTCAGCACCTACACCCGCAAACTGAAGAAGCGCCTCAG 343 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 CAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCG 540 consensus_2858#1 CAAGGACACTCAGGAGATCAAAAGGCATGTTTCTGACTACTTTGAGGATATTCAGACCCG 403 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 CACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACA 600 consensus_2858#1 CACCTCAGACAACATGGAGAACATGAGGGCCCAGTTCGTCCCCTACGTCAGTCAGGTACA 463 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 AGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAG 660 consensus_2858#1 AGACAACGCCCAGGCCAAGATCACCACCCTGAACCAGCTGCTCCAGTCACAGGTGGGGAG 523 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 CATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACAAGAT 720 consensus_2858#1 CATGAAGGAAGGCTTTGAGAAGACCACCGAGGATCTGCGCTCCGCCCTGGAGGACAAGAT 583 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 GGAGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTA 780 consensus_2858#1 GGAGGAAATCCGAGGCTGGTTCCAGCCCTACGTCTCCATGTTCACAATGTAAACCCTCTA 643 consensus_2858#2 ------------------------------------------------------------ consensus_2858#0 AATGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAG 840 consensus_2858#1 AACGTGGACTGTTCATCCATCTCTGAGGGTCAAACCCTCCGGCTGCATTCACATATGCAG 703 consensus_2858#2 -------------------------------------------------------TGCAT 5 **** consensus_2858#0 GA-AGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTGAAAAAAAAAAAAA 899 consensus_2858#1 GA-AGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTGAAGGTGTGAGCA- 761 consensus_2858#2 CTCAGTGTCACCAGATCAATGTGTCACCAATAAAGGCGTGAGGCTTGA------------ 53 ********************************************* consensus_2858#0 AAAAAAACCCCGGGGGGGGCCCGGGACCCAAGTTTTGGCCC 940 consensus_2858#1 ----------------------------------------- consensus_2858#2 ----------------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |