These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_482#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 439 fasta sequence [TTTGAAAGCTTTATTTATCCAGGTGAGTTAAATAAAAACAAATTCTTACTTACAAGGGAGACCTGTGGGTCAACAGAATGTTGGTGATTTTTAAAAAGAATAACTTGATTAACGAGATTATTGCAAATTTAGACATTTTCGTTCATGTACAATCCTTCTGTGGAACCTTGTGGTTTTGTGTGAAATCAATTGTTTTAGATCTTTCCATGTTTCAAGTTACAACCTTGTTTTTTTTTTGCAGGACCAAAGTGAAGGATGGAGAGATGAAGGCCTGCCTCAGATGGCTCGCAAACTTCCATGCTCTCTTCCTGGGAGTAGTGCCAGAAAATCTGTGGCCTGTTGGGACCTACTGGCACCTGGAGACTCGGCCGGACGAGTTGGAGGCCATGGATCATCCCAAACTCAAAGCGGCTGCTGGAGAGATTGACAGGATTCTAAG] [+] EMBL CA332232 [TTTGAAAGCTTTATTTATCCAGGTGAGTTAAATAAAAACAAATTCTTACTTACAAGGGAGACCTGTGGGTCAACAGAATGTTGGTGATTTTTAAAAAGAATAACTTGATTAACGAGATTATTGCAAATTTAGACATTTTCGTTCATGTACAATCCTTCTGTGGAACCTTGTGGTTTTGTGTGAAATCAATTGTTTTAGATCTTTCCATGTTTCAAGTTACAACCTTGTTTTTTTTTTGCAGGACCAAAGTGAAGGATGGAGAGATGAAGGCCTGCCTCAGATGGCTCGCAAACTTCCATGCTCTCTTCCTGGGAGTAGTGCCAGAAAATCTGTGGCCTGTTGGGACCTACTGGCACCTGGAGACTCGGCCGGACGAGTTGGAGGCCATGGATCATCCCAAACTCAAAGCGGCTGCTGGAGAGATTGACAGGATTCTAAG] consensusID : consensus_482#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 416 fasta sequence [GTACCAGGATATTGTCCTGCAGGCGTGCAGAGCTTGAGTGGCTGCATGTGGGTGCAAAGATCCAAACTCTGTGGAGCGGGTACGGAGAGATAGTCCGGCTCCACCTGGAGGGTGGTGAGCGGCCCTCCGTCATTGTCAAACATGTCAAGTTTCCAGCCGAAGCTGAACATCCAGGCGGCAGGAACACAAACCATTCACACCTGCGTAAAGTGAGGTCATACCAGGTGGAGACATACTGGTACCAGAACTATTTCACTAATCAGGGTTGGCGGATCCCTGCCTGCCTGGCTGCCTATTCCCACGGAGACGAGATGCTGATGGNGTTAGAGGATCTGGATGCAGCCGGTTATAGTCAGAGAAGGACCAAAGTGAAGGATGGAGAGATGAAGGCCTGCCTCAGATGGCTCGCAAAACTT] [+] EMBL FR0063581 [GTACCAGGATATTGTCCTGCAGGCGTGCAGAGCTTGAGTGGCTGCATGTGGGTGCAAAGATCCAAACTCTGTGGAGCGGGTACGGAGAGATAGTCCGGCTCCACCTGGAGGGTGGTGAGCGGCCCTCCGTCATTGTCAAACATGTCAAGTTTCCAGCCGAAGCTGAACATCCAGGCGGCAGGAACACAAACCATTCACACCTGCGTAAAGTGAGGTCATACCAGGTGGAGACATACTGGTACCAGAACTATTTCACTAATCAGGGTTGGCGGATCCCTGCCTGCCTGGCTGCCTATTCCCACGGAGACGAGATGCTGATGGNGTTAGAGGATCTGGATGCAGCCGGTTATAGTCAGAGAAGGACCAAAGTGAAGGATGGAGAGATGAAGGCCTGCCTCAGATGGCTCGCAAAACTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_482#0 -TTTGAAAGCTTTATTTATCCAGGTGAGTTAAATAAAAACAAATTCTTACTTACAAGGGA 59 consensus_482#1 GTACCAGGATATTGTCC-TGCAGGCGTGCAGAGCTTGAGTGGCTGCATGTGGGTGCAA-A 58 * * ** * * **** * * * * * * * * consensus_482#0 GACCTGTGGGTCAACAGAATGTTGGTGATTTTTAAAAAGAATAACTTGATTAACGAGATT 119 consensus_482#1 GATCCA-AACTCTGTGGAGCG--GGT-ACGGAGAGATAGTCCGGCTCCACCTGGAGGGTG 114 ** * ** ** * *** * * * ** ** * * * consensus_482#0 ATTGCAAAT--TTAGACATTTTCGTTCATGTACAATCCTTCTGTGGAACCTTGTGGTTTT 177 consensus_482#1 GTGAGCGGCCCTCCGTCATTGTCAAACATGT-CAAGTTTCCAGCCGAAGCTGAACATCCA 173 * * * **** ** ***** *** * * * *** ** * consensus_482#0 G----TGTGAAATCAATTGTTTTAGATCTTTCCATGTTTCAAGTTACAACCTT----GTT 229 consensus_482#1 GGCGGCAGGAACACAAACCATTCACACCTGCGTAAAGTG-AGGTCATACCAGGTGGAGAC 232 * *** *** ** * * ** * * * ** * * * * consensus_482#0 TTTTTTTTGCAGGACCAAAGTGAAGGATGGAGA--GATGAAGGCCTGCCTCAGATGGCTC 287 consensus_482#1 ATACTGGTACCAGAACTATTTCACTAATCAGGGTTGGCGGATCCCTGCCT-GCCTGGCT- 290 * * * * ** * * * * ** * * * * ******* ***** consensus_482#0 GCAAACTTCCATGCTCTCTTCCTGGGAGTAGTGCCAGAAAATCTGTGGCCTGTTGGGACC 347 consensus_482#1 GCCTATTCCCACGGAGACGAGATGCTGATGGNGTTAGAGGATCTGGATGCAGCCGG---T 347 ** * * *** * * ** * * * *** ***** * * ** consensus_482#0 TACTGGCACCTGGAGACTCGGCCGGACGAGTTGGAGGCCATGGATCATCCCAAACTCAAA 407 consensus_482#1 TATAGTCAGAGAAGGACCAAAGTGAAGGATGGAGAGATGAAGGCCTGCCTCAGATGGCTC 407 ** * ** *** * * ** *** * ** * ** * consensus_482#0 GCGGCTGCTGGAGAGATTGACAGGATTCTAAG 439 consensus_482#1 GCAAAACTT----------------------- 416 ** * |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |