Welcome to our web pages and tools for bioinformatics analysis of data generated by "omics" studies.
This activity of the Lab is supported by the Italy-US Oncology Program, being the Lab involved in the development of bioinformatics tools to help partners of the Program in the analysis of experimental data from oncoproteomics studies.
For any comment, suggestions, request, please send an e-mail to angelo.facchiano (at) isa.cnr.it.
ALI-SPECTRA is designed to align signals from mass spectra, to verify the presence of common peaks as well as to highlight specific signals. NEAPOLIS offers a quick an robust procedure to align signals from mass spectra, with different features in comparison to ALI-SPECTRA.PROTEIN_FINDER accepts a list of protein accession numbers and analyze features of the sequences, as amino acid composition, number of observable peptides, and others.
LIST_COMP is designed to compare two lists of accession numbers, or other codes, and evidence repetitions in the lists, common and unique codes.
ASC is a collection of active sequences of pepetides, useful to search for similarities of a given sequence with proteins segments and peptides with a ological activity.
PROSCAN is a tool to search patterns within a given protein sequence, and perform composition analysis.
HELM is a software developed to search for HELix Motifs within protein sequences.
Other tools coming soon ...
Please contact Angelo Facchiano (angelo dot facchiano at isa dot cnr dot it) for more information, suggestions, request for more tools.