Module: Record

Bio/Blast/Record.py

Record.py

Classes: Blast Holds all the information from a blast search. PSIBlast Holds all the information from a psi-blast search.

Header Holds information from the header. Description Holds information about one hit description. Alignment Holds information about one alignment hit. HSP Holds information about one HSP. MultipleAlignment Holds information about a multiple alignment. DatabaseReport Holds information from the database report. Parameters Holds information from the parameters.

Imported modules

import string

Classes

Alignment	Stores information about one hit in the alignments section.
Blast	Saves the results from a blast search.
DatabaseReport	Holds information about a database report.
Description	Stores information about one hit in the descriptions section.
HSP	Stores information about one hsp in an alignment hit.
Header	Saves information from a blast header.
MultipleAlignment	Holds information about a multiple alignment.
PSIBlast	Saves the results from a blastpgp search.
Parameters	Holds information about the parameters.
Round	Holds information from a PSI-BLAST round.

Table of Contents

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