Clustalw.py

A set of classes to interact with the multiple alignment command line program Clustalw (which is the command line version of the current graphical Clustalx aligment program).

This requires Clustalx1.8.1 available from:

ftp://ftp-igbmc.u-strasbg.fr/pub/ClustalX/.

Older versions may work, but haven't been tested yet.

functions: o parse_file o do_alignment

classes: o ClustalAlignment o _AlignCreator o MultipleAlignCL