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Biopython API documentation: Bio.sources  

Base code for representing a database source of sequences.

This module contains code which can be used to describe a specialized location where sequence information is available from. The code here covers the basic cases (ie. a CGI script to retrieve information from) as classes (CGI, in our example) which need to be supplied the database specific information. So, if you want to programmatically describe a database, this is the place to start looking for useful classes.

Modules and Packages   

Bio/sources/

EBI

EBI web page: http://www.ebi.ac.uk/

ExPASy

ExPASy web page: http://www.expasy.ch/

NCBI

NCBI Entrez: http://www.ncbi.nlm.nih.gov/Entrez/

RCSB

http://www.rcsb.org/

__init__

Base code for representing a database source of sequences.


Table of Contents

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