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  • News & Update

    News (September 2009) CD-HIT web server is now available to run cd-hit or download some pre-calculated clusters.
    News (December 2006) I made some major updates including several very useful new options for clustering such as alignment coverage control, switch between local and global sequence identity. Please check the newest release and have a try. Weizhong Li.
    News (February 2006) I recently developed several new programs based on CD-HIT's algorithm: CD-HIT-2D, CD-HIT-EST and CD-HIT-EST-2D. CD-HIT-2D compares two protein sets and report similar matches between them. CD-HIT-EST and CD-HIT-EST-2D are nucleotide versions. Weizhong Li.






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