[BiO BB] amino acid distribution in multiple alignment

Dana Reichmann danag at bioinfo.weizmann.ac.il
Wed Dec 18 21:55:34 EST 2002


Hi all,

I am looking for a program or script for calculation of amino acid
distribution in specific column in ungaped multiple alignment. Most program
I know calculates PSSM that includes weights calculation according to PAM or
Blosum matrixes. I  just need a simple representation of amino acid
distribution  in specific column in ungaped multiple alignment.


Thanks a lot,
Dana Reichmann
-- 



-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://www.bioinformatics.org/pipermail/bbb/attachments/20021218/b76507b0/attachment.html>


More information about the BBB mailing list