[BiO BB] query

Sudhindra.Gadagkar at notes.udayton.edu Sudhindra.Gadagkar at notes.udayton.edu
Tue Nov 26 10:46:34 EST 2002


Nikhil,

This link provides the names of all the genes involved in apoptosis (150 of
them):
http://www.informatics.jax.org/searches/GOannot_report.cgi?id=GO:0006915

I used the following sequence:

Start at the GO consortium (http://www.geneontology.org/)
Click on GO Browsers
Click on MGI GO Browser (there are others too)
Click on Biological Process (sometimes you've got to keep trying)
You get what is called a term-detail.
Under the Ontologies, you have "death".  keep opening that up until you
come to apoptosis.
Click on apoptosis and you should get the following


                                                   
                                     (Embedded     
                                     image moved   
                                     to file:      
                                     pic28888.gif) 
                                     apoptosis     
                                     [GO:0006915]  
                                     (150 genes,   
                                     196           
                                     annotations)  
                                                   



Click on this to get your results

There are probably easier and shorter routes to your results, but this
works.

Good luck!

Sudhindra Gadagkar



---------------------------------------------------------------------------------------------------------

Sudhindra R. Gadagkar, Ph.D.
Department of Biology
University of Dayton
300 College Park
Dayton, OH 45469-2320

Ph: (937) 229-2410
Fax: (937) 229-2021
Email: gadagkar at notes.udayton.edu
---------------------------------------------------------------------------------------------------------


                                                                                                                                       
                      nikhil gadewal                                                                                                   
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Dear all members,

     Is there any way to find the genes involved in
particular biological process. for eg. apoptosis.
     Thank you in advance.

with regards,
Nikhil

=====

NIKHIL. S. GADEWAL

Cancer Research Institute,

ACTREC, Tata memorial Centre,

Kharghar, Navi Mumbai, Mumbai.

cri3 at soochak.ncst.ernet.in

Phone no. 7412921/22  extn. 5125


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