[BiO BB] A question about profile database in psi-blast.

Rong Chen rong at bu.edu
Fri Dec 5 13:20:29 EST 2003


Normally, we align a profile against a sequence database in psi-blast. I
heard that we could also cat all profiles to create a database, and align
a sequence against this profile database. Did anyone hear anything about
it? Is it a new program or a new option in psi-blast?

Thank you.

Rong Chen, Ph.D.
Protein Engineering
Accelrys Inc.
San Diego, CA 92121
Tel: (858)799-5304(office)
E-mail: rong at zlab.bu.edu   http://zlab.bu.edu/~rong

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