[BiO BB] display DNA multiple alignements with gray levels

[c.plessy at mangoosta.net]

Hello,

	I am looking for a free program that would process DNA
multiple alignments, so that that conserved nucleotides would be on a
black background, moderately conserved on a grey background according
to the frequency of the most frequent nucleotide, and non conserved
nucleotides on a white background.

	Boxshade does that kind of thing, but uses gray for
similarity, which is not useful for DNA multiple alignments.
(<http://www.ch.embnet.org/software/BOX_form.html>)

	Ideally, the output would be in eps, or something else
importable in Illustrator.

I would be mega happy If somebody knew such a tool.

Have a nice day,

Charles

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