[BiO BB] parsing repeatmasker .tbl files

Matt McCormick mjmccorm at mtu.edu
Thu Jun 24 21:39:47 EDT 2004


Hi,
I've generated thousands of repeatmasker .tbl files.  I want to be able to
extract certain table information(ie filename, total_length, number of
retroelements, and length occupied).  Is there any bioperl documentation
on doing this?  I've looked at the bioperl api for 
Bio::Tools::RepeatMasker but it wasn't much help to me.  Any suggestions? 
Thank you.

-Matt McCormick

Undergraduate in Bioinformatics
Michigan Technological University
http://www.bio.mtu.edu/~mjmccorm




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