[BiO BB] DNA Strider
Gary Van Domselaar
gary at www.bioinformatics.org
Tue Mar 30 23:34:05 EST 2004
The guy who made sms2 also makes a map viewer called CGView. It has been
implemented in the web server 'PlasMapper':
You can contact him to see about the availability of CGView itself:
stothard at ualberta.ca
On Tue, 30 Mar 2004, Yannick Wurm wrote:
> Thanks for all the feedback!
> I have checked out both sms2 and emboss, and both seem very powerfull.
> From what I gather though, both only seem to output text!
> For restriction enzyme cleavage sites, getting an overview with a
> schema such as this one can be a great help though:
> I know I won't be able to replace DNA Strider before I find something
> that makes nice visual maps as well...
> Did I miss something?
> On 30-Mar-04, at 7:14 PM, Gary Van Domselaar wrote:
> > Hey Gang,
> > For platform-independant sequence _manipulation_ there is the sequence
> > manipulation suite:
> > http://bioinformatics.org/sms2
> > SMS2 and EMBOSS together cover most of what you can expect to get out
> > of
> > an old sequence analysis package like DNA strider.
> > Decidedly,
> > g.
> \\ http://yannick.poulet.org icq: 22044361
> \\ idh at poulet.org tel: ++22.214.171.124.71.92
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