[BiO BB] Protein sequence clustering program needed

[Stefanie Lager]

CD-HIT is probably the most commonly used clustering program
http://bioinformatics.ljcrf.edu/cd-hi/

Stefanie

> I need a protein sequence clustering program for a relatively low
> sequence ID (30-40%), for a small (<=200) number of sequences. Ideas?
> 
> Thanks,
> 
> Iddo
> 
> --
> 
> Iddo Friedberg, Ph.D.
> The Burnham Institute
> 10901 N. Torrey Pines Rd.
> La Jolla, CA 92037
> Tel: (858) 646 3100 x3516
> Fax: (858) 713 9930
> http://ffas.ljcrf.edu/~iddo
> 
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