[BiO BB] megablast and blastp index errors

[Martin Gollery]

astral100 is a protein database- Megablast is only for nucleotides, and so
it is looking for astral100.nin which is not there.

Marty Gollery

On 8/30/06, rich <rich at thevillas.eclipse.co.uk> wrote:
>
> Hi,
>
> I created a blastable db with formatdb (2.2.10):
>
> formatdb -i astral100
>
> I can run blastall -p blastp and it works fine
> but when I run megablast I get
>
> [megablast] WARNING: Could not find index files for database astral100
>
> Any ideas?
> Thanks
> Rich
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-- 
-- 
Martin Gollery
Associate Director
Center For Bioinformatics
University of Nevada at Reno
Dept. of Biochemistry / MS330
775-784-7042
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