[BiO BB] Quantifying protein Domains En Mass
hararid at bgu.ac.il
Mon Jun 5 03:36:37 EDT 2006
I am after a way in which I can analyze large data sets of protein
sequences, where the readout is a quantification of different protein
domains that are found within a given list of sequences (e.g. a list of
500 protein sequences in FASTA format). Preferably the output would be
at the systems level (e.g. 230 Tyrosine Kinase domains) rather than that
describing domains only at a protein-by protein level.
Daniel Harari, Ph.D.
National Institute for Biotechnology in the Negev
Building 39, room -113
Ben-Gurion University of the Negev
Beer-Sheva 84105, Israel
Email: hararid at bgu.ac.il
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