[BiO BB] high school project in bioinformatics

Mike Marchywka marchywka at hotmail.com
Thu Jun 7 12:03:23 EDT 2007


Rule number 1: Never pay for anything:
Before you try matlab, give "R" a shot- free and IIRC has source code too.

http://cran.cnr.berkeley.edu/

Clustalw source code is free and it builds under cygwin ( I just did this 
myself).


If you are just learning and go with the coloring idea, try this whey you 
get cygwin running:

506  lynx -dump "http://www.expasy.org/cgi-bin/protscale.pl?Q7U3V6" > plinks
  507  cat plinks | grep pscale | awk '{print $2}' > links
  508  more links
  509  for f in `cat links`; do echo $f ; done
  510  for f in `cat links|head -n 1`; do lynx -dump "$f" ; done

516  for f in `cat links`; do echo "$f"; lynx -dump "$f"| grep 
"scale:\|^[A-Z][a-z][a-z]:" ; done >extracted_scales





Mike Marchywka
586 Saint James Walk
Marietta GA 30067-7165
404-788-1216 (C)<- leave message
989-348-4796 (P)<- emergency only
marchywka at hotmail.com

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