[BiO BB] RefSeq ids to gene names
dankoc at gmail.com
Mon Nov 24 17:18:48 EST 2008
I don't think that those are RefSeq IDs.
In general, the easiest way to do something like this is using
1. Go to martview.
2. Select the database and species.
3. Do NOT change the selection under filters.
5. Under attributes, select any ID type that you want.
The result will be a table of ID associations that you can export in
the format of your choice...
On Mon, Nov 24, 2008 at 1:31 PM, Gaurav Pandey <pandey.gaurav at gmail.com> wrote:
> Where can I get a text/excel file with a mapping of RefSeq id's to their
> common gene names (such as SYN2, SERPINA3 etc), particularly for homo
> sapiens? The NCBI ftp site was not extremely useful.
> Also, some of the RefSeq IDs I have are of the form 'Contig30743_RC'. Are
> these also RefSeq IDs?
> Any help will be deeply appreciated. Thanks!
> Gaurav Pandey Email: gaurav at cs.umn.edu
> Computer Science Department Webpage: www.cs.umn.edu/~gaurav
> University of Minnesota Tel: 612-701-2494
> BBB mailing list
> BBB at bioinformatics.org
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