[Bio-linux-dev] Upgrade to Bio-Linux 7 (at last)

[Tony Travis]

On 27/09/12 11:34, Tim Booth wrote:
> Hi Tony,
>
> Great stuff - I didn't realise that apt-add-repository wasn't on there
> by default and this has caused you various problems.  I'll modify the
> script to sort that out and I think I can also easily fix the other
> things you mentioned.
>
> The nebc/bio-linux PPA should provide the version of Qiime necessary to
> install bio-linux-qiime on Ubuntu 12.04.  There are a few helper
> applications that the latest Qiime wants which are not yet packaged for
> Bio-Linux, but the core features should all work.  What happens if you
> try to install Qiime now that the PPA is added as a package source?

Hi, Tim.

I ran your original script again, but with the PPA enabled, and it 
installed Qiime without error :-)

> All done - your system is updated to Bio-Linux 7!
> You may want to run 'sudo apt-get autoremove' if that was suggested above.

Thanks!

   Tony.