[Bio-linux-dev] upgrade8 idempotence

[Tony Travis]

Hi, Tim.

Things are looking good now, and the Biostrings problem has gone away.

One remaining problem is that your script seems to install and remove
"python-software-properties" - Is that what you intended to happen?

Bye,

  Tony.

> The following NEW packages will be installed
>   python-software-properties
> 0 to upgrade, 1 to newly install, 0 to remove and 0 not to upgrade.
> Need to get 0 B/19.6 kB of archives.
> After this operation, 137 kB of additional disk space will be used.
> Selecting previously unselected package python-software-properties.
> (Reading database ... 369450 files and directories currently installed.)
> Preparing to unpack .../python-software-properties_0.92.37.1_all.deb ...
> Unpacking python-software-properties (0.92.37.1) ...
> Setting up python-software-properties (0.92.37.1) ...
> Reading package lists... Done
> Building dependency tree
> Reading state information... Done
> Calculating upgrade... Done
> 0 to upgrade, 0 to newly install, 0 to remove and 0 not to upgrade.
>
> Verifying that everything installed...
> All good!
> Scrubbing Java6 packages now we have 7 as default
> Reading package lists... Done
> Building dependency tree
> Reading state information... Done
> Package 'openjdk-6-jre' is not installed, so not removed
> Package 'openjdk-6-jre-headless' is not installed, so not removed
> Package 'openjdk-6-jre-lib' is not installed, so not removed
> 0 to upgrade, 0 to newly install, 0 to remove and 0 not to upgrade.
> Scrubbing HAL as it is obsolete and triggers ugly errors
> Reading package lists... Done
> Building dependency tree
> Reading state information... Done
> Package 'hal' is not installed, so not removed
> 0 to upgrade, 0 to newly install, 0 to remove and 0 not to upgrade.
> Reading package lists... Done
> Building dependency tree
> Reading state information... Done
> The following packages will be REMOVED
>   python-software-properties*

--
Dr. A.J.Travis, University of Aberdeen, Institute of Biological and
Environmental Sciences, Cruickshank Building, St. Machar Drive, Aberdeen
AB24 3UU, Scotland, UK. tel +44(0)1224 272700, fax +44 (0)1224 272 396
http://www.abdn.ac.uk, mailto:tony.travis at abdn.ac.uk, skype:ajtravis


The University of Aberdeen is a charity registered in Scotland, No SC013683.
Tha Oilthigh Obar Dheathain na charthannas clàraichte ann an Alba, Àir. SC013683.