[Bio-Linux] Qiime 1.9

Carlos Morais morais at iq.usp.br
Fri Mar 6 09:57:55 EST 2015


Thankyou Tim. I know that this process can be tiresome and appreciate the
effort.

Regards,
    Carlos

P.S.: Agree with 'no releases on Friday' politics.

On Fri, Mar 6, 2015 at 11:45 AM, Tim Booth <tbooth at ceh.ac.uk> wrote:

> Hi,
>
> So, the update on QIIME 1.9 is that I'd hoped to have it done by the end
> of Feb but I've hit several complications and I'm literally having to
> re-write some bits of the QIIME code to make it work properly with the
> Bio-Linux tool suite, as well as updating various packages that QIIME
> depends on.  QIIME 1.9 looks very much like 1.8 on the surface but under
> the hood it's all been rearranged!
>
> The main job was tackling a pair of packages called
> "python-burrito-fillings" and "python-skbio" that handle all the links
> between QIIME and the tools it uses, but that's done and I'm now on to
> final testing for QIIME itself.
>
> Obviously I want to be very careful before pushing the update out,
> because once you install the update there is no easy way to downgrade
> again.
>
> If I do get it finished and tested today I'll push the update on Monday,
> as I have a rule about no major updates on a Friday afternoon, but this
> thing may yet have more nasty surprises in store for me so no promises.
>
> Thanks for your patience,
>
> TIM
>
> On Fri, 2015-03-06 at 13:05 +0000, Carlos Morais wrote:
> > Hi all,
> >
> >     I would like to know if there is a plan to include the new version
> > of Qiime 1.9 to the repository. If so, when?
> >
> >
> > Thanks,
> >
> >     Carlos
> >
>
> --
> Tim Booth <tbooth at ceh.ac.uk>
> NERC Environmental Bioinformatics Centre
>
> Centre for Ecology and Hydrology
> Maclean Bldg, Benson Lane
> Crowmarsh Gifford
> Wallingford, England
> OX10 8BB
>
> http://environmentalomics.org/bio-linux
> +44 1491 69 2297
>
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