[Bio-linux-list] Installing biolinux 8 Google:main/binary-i386/Packages

Вячеслав Петров vyacheslav.a.petrov at mail.ru
Fri May 27 10:21:06 EDT 2016


 Hello!

I faced this problem some weeks ago. I think there is some bug in the script emersed after Goggle decided to stop support 32-bit repositories. I can't fix the problem and used Biolinux disc image for installation. You can find it here  http://environmentalomics.org/bio-linux-download/  or here  http://ftp.yzu.edu.tw/Linux/bio-linux-iso/  . 

With kind regards,
Vyacheslav
>Пятница, 27 мая 2016, 19:54 +06:00 от Geert <g.cremers at science.ru.nl>:
>
>Dear all,
>
>I was trying to update Ubuntu 14.04 to Biolinux 8, but I keep running
>into the same problem.
>
>Every time I run the command:
>
>wget -qO-  http://nebc.nerc.ac.uk/downloads/bl8_only/upgrade8.sh | sudo
>sh 
>
>it ends with the error message:
>
>W: Failed to fetch
>http://dl.google.com/linux/chrome/deb/dists/stable/Release Unable to
>find expected entry 'main/binary-i386/Packages' in Release file (Wrong
>sources.list entry or malformed file)
>
>Using the solution from
>https://bugs.launchpad.net/bio-linux/+bug/1567873 , I could get 
>apt-get update to work without error messages, but when I subsequently
>rerun the command:
>
>wget -qO-  http://nebc.nerc.ac.uk/downloads/bl8_only/upgrade8.sh | sudo
>sh 
>
>the error message returns is if nothing happened. 
>
>Afterwards apt-get update wont work either anymore(same error message).
>
>I get the feeling the upgrade8.sh script keeps replacing the files that
>I need to change in order to get the thing going.
>
>I've been running in circles all day so far. Any ideas are therefor more
>than welcome.
>
>
>Kind regards
>
>Geert 
>
>
>PS.(now that I am writing an email anyways) I have already a good deal
>of programs on my computer that will be installed with Biolinux. Will
>that cause any difficulties.
>
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>Bio-Linux-list at bioinformatics.org
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С уважением,
м.н.с. ЦНИЛ ГБОУ ВПО СибГМУ (г.Томск) 
Вячеслав Петров
vyacheslav.a.petrov at mail.ru
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