[BioBrew Users] Fixed modulefiles RPM or source?

Glen Otero glen at callident.com
Fri Oct 15 10:48:12 EDT 2004


On Oct 15, 2004, at 5:28 AM, Humberto Ortiz Zuazaga wrote:

> Glen Otero <glen at callident.com> wrote:
>
>>> export MODULEPATH=${MODULEPATH:+$MODULEPATH:}/opt/BioBrew/modulefiles
>>
>> This syntax looks a little weird to me. Shouldn't this read:
>>
>>> export MODULEPATH=${MODULEPATH:+$MODULEPATH}:/opt/BioBrew/modulefiles
>> (with the colon outside the braces)?
>
> No, we're trying to avoid the path having a colon if it only has 1
> component. Look at the ganglia-binaries.sh, for example.
>
> Glen Otero <glen at callident.com> wrote:
>
>> Modules doesn't put the apps in your execution path
>> automatically. They are be used to switch between multiple versions of
>> an application.
>
> Yes, like Oscar's switcher program, except switcher *does* put the apps
> in your execution path.
>
> Anyway, here's a chunk from /opt/BioBrew/modulefiles/wise/2.2.0:
>
> prepend-path    PATH            /opt/BioBrew/wise/2.2.0/bin
> prepend-path    WISECONFIGDIR   /opt/BioBrew/wise/2.2.0/wisecfg
>
> It looks to me like it's trying to put wise on my path, I just don't
> know what program is supposed to be reading these modulefiles.

Try the command  'module avail' and 'module load'
>
> -- 
> Humberto Ortiz Zuazaga
> Programmer-Archaeologist
> High Performance Computing facility
> University of Puerto Rico
> http://www.hpcf.upr.edu/~humberto/
>
>
Glen Otero, Ph.D.
Linux Prophet
619.917.1772




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