[Bioclusters] Debian cluster
Nox
bioclusters@bioinformatics.org
Fri, 19 Sep 2003 11:21:23 -0400
Yes, the FAI pulls the images from a central server,
which is a mirror of other sources,
when we upgrade, or new updates occur, we doenload to the central box,
then the nodes pull the update from this server
Thx
On Fri, 2003-09-19 at 01:28, Matthew Laird wrote:
> The one comment I would like to offer is out of courtesy to the Debian
> community I hope you will have a local mirror or the package archive or
> subset you are using.
>
> On my personal machines I'm a Debian boy all the way just for the apt-get
> reason. But if you're planning to build a 50+ machine cluster using
> Debian then run an apt-get upgrade on all of them when a patch comes
> out... that could add noticable strain to the mirrors over time as well as
> your institution's connection.
>
> I know on campus we have a Redhat mirror just for on campus use. I also
> have scripts to keep the subset I use on our cluster current and the
> machines patched.
>
> This is definitely an avenue you might want to investgate for the courtesy
> reason plus it's just faster to install from a local mirror.
>
> Another advantage I've learned about having a local mirror, especially
> with Debian, is you can freeze the packages at any point you want so you
> can always recreate the exact same configuration with no risk of package
> upgrades conflicting with something. That is one beef I had with Debian a
> few years ago, mysterious package upgrades that sometimes broke other
> packages, but I guess that's what you get when using the unstable release.
> :)
>
> Anyhow, just wanted to pass along those lessons I've learned. Good luck,
> and let me know how Debian works out as the basis for a cluster. I might
> rebuild mine from RH9 to Debian if you have great successes. :)
>
> On Fri, 19 Sep 2003, Nox wrote:
>
> > We have begun to investigate FAI and Debian for our clustering
> > solutions.
> >
> > I have always been partial to Debian, its my OS of choice,
> > has been for yrs.
> >
> > So when I discovered the clustering tools, I was excited.
> > (FAI, Fully Automated Install)
> >
> > Does anyone have experience with this?
> > Pitfalls, things to watch for,
> > success stories etc.
> >
> > from my perspective:
> >
> > Debian offers ease of use
> > Updates are a snap (apt-get) --Including security
> > Ability to be a very minimalist system
> > Quick access to Biotech tools (bioperl as an example)
> >
> > We currently use debian as our Halted Firewall as well.
> >
> > Thanks in advance
> >
> > Nox
> > GenMicro Systems
> >
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